RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 OPLAHO14841 1288 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
HDDC3-206ENST00000561036 FXR2P51116 673 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDDC3-206ENST00000561036 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
HDDC3-206ENST00000561036 NT5DC1Q5TFE4 455 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 KRT26Q7Z3Y9 468 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 SH3RF1Q7Z6J0 888 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 LDHDQ86WU2 507 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 SAMD3Q8N6K7 520 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 CRYGNQ8WXF5 182 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 CBX8Q9HC52 389 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 PPP1R9AQ9ULJ8 1098 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 ZHX2Q9Y6X8 837 aa19.38■□□□□ 0.69
HDDC3-206ENST00000561036 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
HDDC3-206ENST00000561036 SMC2O95347 1197 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 POLR2MP0CAP2 368 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 SREBF1P36956 1147 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 UBA7P41226 1012 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 PDIA5Q14554 519 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 E2F4Q16254 413 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 TMEM266Q2M3C6 531 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 CCDC174Q6PII3 467 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 PDILTQ8N807 584 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 IGSF22Q8N9C0 903 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 RBM46Q8TBY0 533 aaKnown RBP19.37■□□□□ 0.69
HDDC3-206ENST00000561036 DHX58Q96C10 678 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 BPIFA3Q9BQP9 254 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 DNAJC25Q9H1X3 360 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
HDDC3-206ENST00000561036 EHMT1Q9H9B1 1298 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 CCDC39Q9UFE4 941 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 DDX25Q9UHL0 483 aaKnown RBP19.37■□□□□ 0.69
HDDC3-206ENST00000561036 SCN4AP35499 1836 aa19.37■□□□□ 0.69
HDDC3-206ENST00000561036 POLR2AP24928 1970 aaKnown RBP19.36■□□□□ 0.69
HDDC3-206ENST00000561036 A0A087X0B3 334 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 ZBED4O75132 1171 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 TDP2O95551 362 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 CYP3A4P08684 503 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 NF2P35240 595 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 IREB2P48200 963 aaKnown RBP19.36■□□□□ 0.69
HDDC3-206ENST00000561036 ARHGAP4P98171 946 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 PNOCQ13519 176 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 SH3D19Q5HYK7 790 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 TRIML1Q8N9V2 468 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 TANGO6Q9C0B7 1094 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 CUEDC2Q9H467 287 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 SLC38A10Q9HBR0 1119 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 AFG3L2Q9Y4W6 797 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 PHIPQ8WWQ0 1821 aa19.36■□□□□ 0.69
HDDC3-206ENST00000561036 ZNF536O15090 1300 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 ADM5C9JUS6 153 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 SLC26A4O43511 780 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 SLC37A4O43826 429 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 FLOT1O75955 427 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 CIITAP33076 1130 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 SARSP49591 514 aaKnown RBP19.35■□□□□ 0.69
HDDC3-206ENST00000561036 GHRHRQ02643 423 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-206ENST00000561036 MCF2L2Q86YR7 1114 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 SPATA20Q8TB22 786 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 SMARCE1Q969G3 411 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 PAGE5Q96GU1 130 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 PDLIM2Q96JY6 352 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 MAGEF1Q9HAY2 307 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 DISC1Q9NRI5 854 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 MAP3K20Q9NYL2 800 aaKnown RBP19.35■□□□□ 0.69
HDDC3-206ENST00000561036 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 CCPG1Q9ULG6 757 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 PCDHA5Q9Y5H7 936 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 CSADQ9Y600 493 aa19.35■□□□□ 0.69
HDDC3-206ENST00000561036 MYPNQ86TC9 1320 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 TBX3O15119 743 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 Q4G0T1 1027 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 PDXDC2PQ6P474 469 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-206ENST00000561036 C11orf57Q6ZUT1 292 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-206ENST00000561036 ERCC4Q92889 916 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-206ENST00000561036 TAF1DQ9H5J8 278 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-206ENST00000561036 CTDP1Q9Y5B0 961 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-206ENST00000561036 SNCAIPQ9Y6H5 919 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 PAPPA2Q9BXP8 1791 aa19.34■□□□□ 0.69
HDDC3-206ENST00000561036 MYH7BA7E2Y1 1941 aa19.33■□□□□ 0.69
HDDC3-206ENST00000561036 MYL1P05976 194 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 STAT6P42226 847 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 TXKP42681 527 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 OAZ1P54368 228 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 SEMA3FQ13275 785 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 VGLL4Q14135 290 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 IQCB1Q15051 598 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 RRAGBQ5VZM2 374 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 CABP7Q86V35 215 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 SLFN12Q8IYM2 578 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 CDCA5Q96FF9 252 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 P2RX7Q99572 595 aaKnown RBP19.33■□□□□ 0.68
HDDC3-206ENST00000561036 MAF1Q9H063 256 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.68
HDDC3-206ENST00000561036 WDR90Q96KV7 1748 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms