RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 CCDC196A0A1B0GTZ2 297 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 CFBP00751 764 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 ANKRD1Q15327 319 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 ME3Q16798 604 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 HEATR3Q7Z4Q2 680 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 NECAB1Q8N987 351 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 COL20A1Q9P218 1284 aa19.27■□□□□ 0.67
RPL28-211ENST00000560881 LRRC37A2A6NM11 1700 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 CCL5P13501 91 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 UBXN2AP68543 259 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 PPP2R5BQ15173 497 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 OLFML2BQ68BL8 750 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
RPL28-211ENST00000560881 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
RPL28-211ENST00000560881 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
RPL28-211ENST00000560881 CCND3P30281 292 aaPredicted RBP19.25■□□□□ 0.67
RPL28-211ENST00000560881 HOXA13P31271 388 aaPredicted RBP19.25■□□□□ 0.67
RPL28-211ENST00000560881 MAP3K21Q5TCX8 1036 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 TYW1BQ6NUM6 668 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
RPL28-211ENST00000560881 TRPV1Q8NER1 839 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 TINF2Q9BSI4 451 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 SLC26A6Q9BXS9 759 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 FRMPD3Q5JV73 1810 aa19.25■□□□□ 0.67
RPL28-211ENST00000560881 PFKFB2O60825 505 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 CAPN15O75808 1086 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 SOX10P56693 466 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 MFSD14CQ5VZR4 134 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 POTEFA5A3E0 1075 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 CD2BP2O95400 341 aaKnown RBP19.24■□□□□ 0.67
RPL28-211ENST00000560881 IFNAR1P17181 557 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 RABEP1Q15276 862 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 PKN1Q16512 942 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 SYTL5Q8TDW5 730 aaPredicted RBP19.24■□□□□ 0.67
RPL28-211ENST00000560881 RNF208Q9H0X6 261 aa19.24■□□□□ 0.67
RPL28-211ENST00000560881 CPLX1O14810 134 aa19.23■□□□□ 0.67
RPL28-211ENST00000560881 CYBAP13498 195 aa19.23■□□□□ 0.67
RPL28-211ENST00000560881 ALDH5A1P51649 535 aaPredicted RBP19.23■□□□□ 0.67
RPL28-211ENST00000560881 HSD17B4P51659 736 aa19.23■□□□□ 0.67
RPL28-211ENST00000560881 ARMCX2Q7L311 632 aa19.23■□□□□ 0.67
RPL28-211ENST00000560881 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
RPL28-211ENST00000560881 MCF2L2Q86YR7 1114 aa19.23■□□□□ 0.67
RPL28-211ENST00000560881 STXBP3O00186 592 aa19.22■□□□□ 0.67
RPL28-211ENST00000560881 CTDNEP1O95476 244 aa19.22■□□□□ 0.67
RPL28-211ENST00000560881 SNAI1O95863 264 aaPredicted RBP19.22■□□□□ 0.67
RPL28-211ENST00000560881 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
RPL28-211ENST00000560881 MAMDC4Q6UXC1 1216 aa19.22■□□□□ 0.67
RPL28-211ENST00000560881 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
RPL28-211ENST00000560881 TAAR1Q96RJ0 339 aa19.22■□□□□ 0.67
RPL28-211ENST00000560881 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.22■□□□□ 0.672e-28■■■■■ 30.3
RPL28-211ENST00000560881 RPTORQ8N122 1335 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 PRPF3O43395 683 aaKnown RBP19.21■□□□□ 0.67
RPL28-211ENST00000560881 SCG2P13521 617 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 NAPAP54920 295 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 TRAF1Q13077 416 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 USP17L6PQ6QN14 398 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 EEPD1Q7L9B9 569 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 GTF3C6Q969F1 213 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 SHISA4Q96DD7 197 aa19.21■□□□□ 0.67
RPL28-211ENST00000560881 RNF26Q9BY78 433 aaPredicted RBP19.21■□□□□ 0.67
RPL28-211ENST00000560881 HMX1Q9NP08 348 aaPredicted RBP19.21■□□□□ 0.67
RPL28-211ENST00000560881 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.21■□□□□ 0.67
RPL28-211ENST00000560881 CNGA1P29973 690 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 GHRHRQ02643 423 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 UBE2SQ16763 222 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 ANO1Q5XXA6 986 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 AIFM3Q96NN9 605 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 PAK6Q9NQU5 681 aaPredicted RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 BARHL2Q9NY43 387 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 LIMCH1Q9UPQ0 1083 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 GCOM1H8Y6P7 765 aaPredicted RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 POLR2MP0CAP2 368 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 EIF2AK2P19525 551 aaKnown RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 SSRP1Q08945 709 aaKnown RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 FBXO16Q8IX29 292 aaPredicted RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 LENG1Q96BZ8 264 aaPredicted RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 DEFB118Q96PH6 123 aa19.2■□□□□ 0.66
RPL28-211ENST00000560881 ZHX1Q9UKY1 873 aaPredicted RBP19.2■□□□□ 0.66
RPL28-211ENST00000560881 MEIS2O14770 477 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 ADAMTS3O15072 1205 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 ZNF865P0CJ78 1059 aaPredicted RBP19.19■□□□□ 0.66
RPL28-211ENST00000560881 CCDC83Q8IWF9 413 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
RPL28-211ENST00000560881 RMDN3Q96TC7 470 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 KATNBL1Q9H079 304 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 ADD3Q9UEY8 706 aaKnown RBP19.19■□□□□ 0.66
RPL28-211ENST00000560881 CNPY2Q9Y2B0 182 aa19.19■□□□□ 0.66
RPL28-211ENST00000560881 ASB14A6NK59 587 aa19.18■□□□□ 0.66
RPL28-211ENST00000560881 CPLX2Q6PUV4 134 aaKnown RBP19.18■□□□□ 0.66
RPL28-211ENST00000560881 TRIM22Q8IYM9 498 aa19.18■□□□□ 0.66
RPL28-211ENST00000560881 DNERQ8NFT8 737 aa19.18■□□□□ 0.66
RPL28-211ENST00000560881 TMEM106CQ9BVX2 250 aa19.18■□□□□ 0.66
RPL28-211ENST00000560881 PXMP2Q9NR77 195 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms