RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 COL9A3Q14050 684 aaPredicted RBP15.05■□□□□ -0
CTDSPL2-209ENST00000560620 LRRC26Q2I0M4 334 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 ADCK5Q3MIX3 580 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 RASEFQ8IZ41 740 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ -0
CTDSPL2-209ENST00000560620 ASTN1O14525 1302 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 SYNRGQ9UMZ2 1314 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 SYN1P17600 705 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
CTDSPL2-209ENST00000560620 MICU3Q86XE3 530 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 RGS22Q8NE09 1264 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 DNERQ8NFT8 737 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 TBC1D5Q92609 795 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 RRP36Q96EU6 259 aaKnown RBP15.04■□□□□ -0
CTDSPL2-209ENST00000560620 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
CTDSPL2-209ENST00000560620 MAP3K14Q99558 947 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 RIOX1Q9H6W3 641 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 VTA1Q9NP79 307 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 PDGFCQ9NRA1 345 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 SEC63Q9UGP8 760 aaKnown RBP15.04■□□□□ -0
CTDSPL2-209ENST00000560620 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
CTDSPL2-209ENST00000560620 ATP11BQ9Y2G3 1177 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 ALPK3Q96L96 1907 aa15.04■□□□□ -0
CTDSPL2-209ENST00000560620 PNMA6FA0A0J9YX94 578 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.03■□□□□ -0
CTDSPL2-209ENST00000560620 CYTH3O43739 400 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 HSPA4P34932 840 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 GNAQP50148 359 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 TSGA10IPQ3SY00 556 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 GNASQ5JWF2 1037 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 AP5M1Q9H0R1 490 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 LCTP09848 1927 aa15.03■□□□□ -0
CTDSPL2-209ENST00000560620 BAZ2BQ9UIF8 2168 aaKnown RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 ADCY6O43306 1168 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 PPP1R11O60927 126 aaPredicted RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 ADAMTS4O75173 837 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 CPA1P15085 419 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 KCNA10Q16322 511 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 ARHGEF16Q5VV41 709 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 IQSEC1Q6DN90 963 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 BLOC1S2Q6QNY1 142 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 SLC39A5Q6ZMH5 540 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 TLK2Q86UE8 772 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 CMTR1Q8N1G2 835 aaKnown RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 FANCBQ8NB91 859 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 PCSK9Q8NBP7 692 aaKnown RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 NSUN6Q8TEA1 469 aaKnown RBP15.02■□□□□ -0
CTDSPL2-209ENST00000560620 MTMR8Q96EF0 704 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 TAAR1Q96RJ0 339 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 RMDN3Q96TC7 470 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 LZTS2Q9BRK4 669 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 KATNBL1Q9H079 304 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 PRKAG2Q9UGJ0 569 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 SNX14Q9Y5W7 946 aa15.02■□□□□ -0
CTDSPL2-209ENST00000560620 A0A1W2PQ45 241 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 A0A1W2PQY0 241 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 MYADML2A6NDP7 307 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 DYNC1LI2O43237 492 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 EIF2AK2P19525 551 aaKnown RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 PSMA5P28066 241 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 HOXA13P31271 388 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 ACLYP53396 1101 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 RTP1P59025 263 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 IRX5P78411 483 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 EXOSC10Q01780 885 aaKnown RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 SLC35G1Q2M3R5 365 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 APOA5Q6Q788 366 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 SYTL5Q8TDW5 730 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 TSEN34Q9BSV6 310 aaKnown RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 MAF1Q9H063 256 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 STARD7Q9NQZ5 370 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 PHF24Q9UPV7 400 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 DNAH12Q6ZR08 3092 aa15.01□□□□□ -0.01
CTDSPL2-209ENST00000560620 KLF18A0A0U1RQI7 1052 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 MOXD2PA6NHM9 499 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
CTDSPL2-209ENST00000560620 ZBTB43O43298 467 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 ASGR1P07306 291 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 POLR2MP0CAP2 368 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 SMPD1P17405 629 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 CASTP20810 708 aaKnown RBP15□□□□□ -0.01
CTDSPL2-209ENST00000560620 GJA9P57773 515 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 BEX3Q00994 111 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 TRIM60Q495X7 471 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 TAPT1Q6NXT6 567 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 FCHSD1Q86WN1 690 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 SRBD1Q8N5C6 995 aaKnown RBP15□□□□□ -0.01
CTDSPL2-209ENST00000560620 MORC4Q8TE76 937 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 GLT1D1Q96MS3 346 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 PRDM5Q9NQX1 630 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms