RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 ASTN1O14525 1302 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 PFKFB2O60825 505 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 DTNBO60941 627 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 IGHA2P01877 340 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 CACNB2Q08289 660 aaPredicted RBP17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 ME3Q16798 604 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 WWC2Q6AWC2 1192 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 NECAB1Q8N987 351 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 TINF2Q9BSI4 451 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 UNC93B1Q9H1C4 597 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 SLKQ9H2G2 1235 aaPredicted RBP17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 COL20A1Q9P218 1284 aa17.92■□□□□ 0.46
LYSMD2-204ENST00000560491 CFBP00751 764 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 CCL5P13501 91 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 IFNAR1P17181 557 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 TRAF1Q13077 416 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 MCF2L2Q86YR7 1114 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 RGS22Q8NE09 1264 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
LYSMD2-204ENST00000560491 CPLX1O14810 134 aa17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 CCND3P30281 292 aaPredicted RBP17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 HOXA13P31271 388 aaPredicted RBP17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 PRAMEF19Q5SWL8 479 aa17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 TYW1BQ6NUM6 668 aa17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
LYSMD2-204ENST00000560491 HSD17B4P51659 736 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 PKN1Q16512 942 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 PFKFB3Q16875 520 aaPredicted RBP17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 MAMDC4Q6UXC1 1216 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 TRPV1Q8NER1 839 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 RNF26Q9BY78 433 aaPredicted RBP17.89■□□□□ 0.45
LYSMD2-204ENST00000560491 STXBP3O00186 592 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 SNAI1O95863 264 aaPredicted RBP17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 CYBAP13498 195 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 SCG2P13521 617 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 ALDH5A1P51649 535 aaPredicted RBP17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 GHRHRQ02643 423 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 TAAR1Q96RJ0 339 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 RNF208Q9H0X6 261 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 RPTORQ8N122 1335 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 SYNGAP1Q96PV0 1343 aa17.88■□□□□ 0.45
LYSMD2-204ENST00000560491 GCOM1H8Y6P7 765 aaPredicted RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 ST18O60284 1047 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 CD2BP2O95400 341 aaKnown RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 CTDNEP1O95476 244 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 POLR2MP0CAP2 368 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 NAPAP54920 295 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 SOX10P56693 466 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 SSRP1Q08945 709 aaKnown RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 MSL3Q8N5Y2 521 aaKnown RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 HMX1Q9NP08 348 aaPredicted RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 BARHL2Q9NY43 387 aa17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
LYSMD2-204ENST00000560491 POTEFA5A3E0 1075 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 CAPN15O75808 1086 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 PPP1R18Q6NYC8 613 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 FCHSD1Q86WN1 690 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 SHISA4Q96DD7 197 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 MAF1Q9H063 256 aa17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 PAK6Q9NQU5 681 aaPredicted RBP17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
LYSMD2-204ENST00000560491 ASB14A6NK59 587 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 hCG_1984214I3L0E3 225 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 MEIS2O14770 477 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 CDKL5O76039 1030 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 ZNF865P0CJ78 1059 aaPredicted RBP17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 EIF2AK2P19525 551 aaKnown RBP17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 CNGA1P29973 690 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 UBE2SQ16763 222 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 EEPD1Q7L9B9 569 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 ZNF713Q8N859 430 aaPredicted RBP17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 DNERQ8NFT8 737 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 AIFM3Q96NN9 605 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 DEFB118Q96PH6 123 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 RMDN3Q96TC7 470 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 TMEM106CQ9BVX2 250 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
LYSMD2-204ENST00000560491 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms