RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FCER1AP12319 257 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 NDUFV1P49821 464 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 GJA9P57773 515 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 DEFB103AP81534 67 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 NEXNQ0ZGT2 675 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 CWF19L2Q2TBE0 894 aaKnown RBP8.07□□□□□ -1.12
HERC1-208ENST00000560462 EPC2Q52LR7 807 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 SOWAHCQ53LP3 525 aaPredicted RBP8.07□□□□□ -1.12
HERC1-208ENST00000560462 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 CXCL17Q6UXB2 119 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 CATSPERGQ6ZRH7 1159 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
HERC1-208ENST00000560462 SMRP1Q8NCR6 262 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 KREMEN2Q8NCW0 462 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 FLCNQ8NFG4 579 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 WDR66Q8TBY9 1149 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 MSLNLQ96KJ4 702 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 SIL1Q9H173 461 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 UPF3AQ9H1J1 476 aaKnown RBP8.07□□□□□ -1.12
HERC1-208ENST00000560462 MROH8Q9H579 483 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 INCENPQ9NQS7 918 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 CHMP3Q9Y3E7 222 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 COL11A1P12107 1806 aaPredicted RBP8.07□□□□□ -1.12
HERC1-208ENST00000560462 ATAD5Q96QE3 1844 aa8.07□□□□□ -1.12
HERC1-208ENST00000560462 RALGAPA2Q2PPJ7 1873 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 SALL1Q9NSC2 1324 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 NEURL1BA8MQ27 555 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 C1QTNF9BB2RNN3 333 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 PPP1R3GB7ZBB8 358 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 LINC01565O15544 149 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 SUPT20HL2P0C7V6 817 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 C1QTNF9P0C862 333 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 CYP2C9P11712 490 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 AOC1P19801 751 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 RRP1P56182 461 aaKnown RBP8.06□□□□□ -1.12
HERC1-208ENST00000560462 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
HERC1-208ENST00000560462 UNQ6494/PRO21346Q6UXR6 183 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 SAMD11Q96NU1 681 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 SPATC1LQ9H0A9 340 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 IGFLR1Q9H665 355 aa8.06□□□□□ -1.12
HERC1-208ENST00000560462 ZHX1Q9UKY1 873 aaPredicted RBP8.06□□□□□ -1.12
HERC1-208ENST00000560462 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
HERC1-208ENST00000560462 TENM4Q6N022 2769 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 GRIN2DO15399 1336 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 IGF2RP11717 2491 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 SRRM3A6NNA2 597 aaPredicted RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 PI15O43692 258 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 LDHBP07195 334 aaKnown RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 PGK2P07205 417 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 NUDT7P0C024 238 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 PRDX5P30044 214 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 GTF2F1P35269 517 aaKnown RBP eCLIP8.05□□□□□ -1.12
HERC1-208ENST00000560462 ADAM15Q13444 863 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 ZYXQ15942 572 aaKnown RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 VARS2Q5ST30 1063 aaKnown RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 CWF19L1Q69YN2 538 aaKnown RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 SUMF1Q8NBK3 374 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 TATDN2Q93075 761 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 C12orf42Q96LP6 360 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 ALDH8A1Q9H2A2 487 aaPredicted RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 HERC5Q9UII4 1024 aaKnown RBP8.05□□□□□ -1.12
HERC1-208ENST00000560462 SORCS3Q9UPU3 1222 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 INSL6Q9Y581 213 aa8.05□□□□□ -1.12
HERC1-208ENST00000560462 IGSF10Q6WRI0 2623 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 IQCF3P0C7M6 154 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 RBM25P49756 843 aaKnown RBP8.04□□□□□ -1.12
HERC1-208ENST00000560462 JAG1P78504 1218 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 BEX3Q00994 111 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 COASYQ13057 564 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 CCDC57Q2TAC2 916 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 PACS2Q86VP3 889 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
HERC1-208ENST00000560462 FEZ1Q99689 392 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 TRMT13Q9NUP7 481 aaKnown RBP8.04□□□□□ -1.12
HERC1-208ENST00000560462 USP18Q9UMW8 372 aa8.04□□□□□ -1.12
HERC1-208ENST00000560462 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
HERC1-208ENST00000560462 PTPRSQ13332 1948 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 ZNF462Q96JM2 2506 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 SLC30A4O14863 429 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 CTAGE5O15320 804 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 ADCY6O43306 1168 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 HOXA2O43364 376 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 KINO60870 393 aaKnown RBP8.03□□□□□ -1.12
HERC1-208ENST00000560462 ATF7P17544 494 aaPredicted RBP8.03□□□□□ -1.12
HERC1-208ENST00000560462 VCAM1P19320 739 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 SOX11P35716 441 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 CASP7P55210 303 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 PLS1Q14651 629 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 ZNF792Q3KQV3 632 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 RIN2Q8WYP3 895 aaPredicted RBP8.03□□□□□ -1.12
HERC1-208ENST00000560462 RTP3Q9BQQ7 232 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms