RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MOV10L1Q9BXT6 1211 aaKnown RBP10.79□□□□□ -0.68
HERC1-206ENST00000559996 SPATC1LQ9H0A9 340 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 RIC8AQ9NPQ8 531 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 CCPG1Q9ULG6 757 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 PCDHA6Q9UN73 950 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 PCDHA8Q9Y5H6 950 aa10.79□□□□□ -0.68
HERC1-206ENST00000559996 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 CA12O43570 354 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 TLR2O60603 784 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 ZSCAN22P10073 491 aaPredicted RBP10.78□□□□□ -0.68
HERC1-206ENST00000559996 PDCP20941 246 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 HSD17B4P51659 736 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 NAPAP54920 295 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 ERVK-9P63128 1117 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 ERVK-24P63145 666 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 CAP1Q01518 475 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
HERC1-206ENST00000559996 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 USP17L6PQ6QN14 398 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 PAXIP1Q6ZW49 1069 aaPredicted RBP10.78□□□□□ -0.68
HERC1-206ENST00000559996 BLIDQ8IZY5 108 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 ANKRD13CQ8N6S4 541 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 RASGRP4Q8TDF6 673 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 CHAMP1Q96JM3 812 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 PORCNQ9H237 461 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 PSTPIP2Q9H939 334 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 CHMP5Q9NZZ3 219 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 COL20A1Q9P218 1284 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 ABCB11O95342 1321 aa10.78□□□□□ -0.68
HERC1-206ENST00000559996 WNT7AO00755 349 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 F13A1P00488 732 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 ALAS1P13196 640 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 ERCC3P19447 782 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 CTGFP29279 349 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 GCLCP48506 637 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 TOB1P50616 345 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 NLRP5P59047 1200 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 CRHR2Q13324 411 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 TAF1CQ15572 869 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 UBE2SQ16763 222 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 TKFCQ3LXA3 575 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 GALNT17Q6IS24 598 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 FAM173BQ6P4H8 233 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 DIS3L2Q8IYB7 885 aaKnown RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 GTF3C2Q8WUA4 911 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 CRYGNQ8WXF5 182 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 PARK7Q99497 189 aaKnown RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 FOXP1Q9H334 677 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 EFCC1Q9HA90 598 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 RNF186Q9NXI6 227 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 CPA4Q9UI42 421 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.69
HERC1-206ENST00000559996 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
HERC1-206ENST00000559996 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
HERC1-206ENST00000559996 SLC25A27O95847 323 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 XBP1P17861 261 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 NUCB2P80303 420 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
HERC1-206ENST00000559996 FERMT3Q86UX7 667 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 SHCBP1Q8NEM2 672 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 CHST13Q8NET6 341 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
HERC1-206ENST00000559996 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
HERC1-206ENST00000559996 C6orf50Q9HD87 102 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
HERC1-206ENST00000559996 RNF146Q9NTX7 359 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 ASTN1O14525 1302 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 LCTP09848 1927 aa10.76□□□□□ -0.69
HERC1-206ENST00000559996 DNAJC25-GNG10A0A024R161 153 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 H3BQV1 296 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 TBC1D8O95759 1140 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 CALML3P27482 149 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 GNA11P29992 359 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 KRT2P35908 639 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 ADCY7P51828 1080 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 MRPL12P52815 198 aaKnown RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 EMP3P54852 163 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 TRAF1Q13077 416 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
HERC1-206ENST00000559996 PLS1Q14651 629 aa10.75□□□□□ -0.69
HERC1-206ENST00000559996 IFFO2Q5TF58 517 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms