RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 BEX3Q00994 111 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 USH1GQ495M9 461 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 KIAA1211Q6ZU35 1233 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 TLK2Q86UE8 772 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 MAF1Q9H063 256 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 AP5M1Q9H0R1 490 aa23.9■■□□□ 1.42
CHRNA3-207ENST00000559941 A0A0U1RQG5 324 aaPredicted RBP23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 DYNC1LI2O43237 492 aaPredicted RBP23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 FAAP100Q0VG06 881 aa23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 DNERQ8NFT8 737 aa23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 MAP4K1Q92918 833 aa23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 VTI1AQ96AJ9 217 aa23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 TMEM39AQ9NV64 488 aa23.89■■□□□ 1.41
CHRNA3-207ENST00000559941 ABCB11O95342 1321 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 MROH7Q68CQ1 1323 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 ARVCFO00192 962 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 ITGB8P26012 769 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 FSCN1Q16658 493 aaKnown RBP23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 TMEM63BQ5T3F8 832 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 JMJD4Q9H9V9 463 aa23.88■■□□□ 1.41
CHRNA3-207ENST00000559941 RBM47A0AV96 593 aaKnown RBP23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 E7EWF7 191 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 CABYRO75952 493 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 RAG1P15918 1043 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 PTGS1P23219 599 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 EDNRBP24530 442 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 QRICH1Q2TAL8 776 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 DUSP28Q4G0W2 176 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 STAG2Q8N3U4 1231 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 MPHOSPH6Q99547 160 aaKnown RBP23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 VAT1LQ9HCJ6 419 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 TAF6LQ9Y6J9 622 aa23.87■■□□□ 1.41
CHRNA3-207ENST00000559941 DHX16O60231 1041 aaKnown RBP23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 ZEB2O60315 1214 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 SHHQ15465 462 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 RALYLQ86SE5 291 aaKnown RBP23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 FBXO11Q86XK2 927 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 NCOA7Q8NI08 942 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 WDR11Q9BZH6 1224 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 MAD2L2Q9UI95 211 aa23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 BAZ2BQ9UIF8 2168 aaKnown RBP23.86■■□□□ 1.41
CHRNA3-207ENST00000559941 PALM3A6NDB9 673 aaPredicted RBP23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 B4DLN1 442 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 IFIT3O14879 490 aaKnown RBP23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 MRPL12P52815 198 aaKnown RBP23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 PDE4DQ08499 809 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 CXCL17Q6UXB2 119 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 STOX1Q6ZVD7 989 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 SLC43A3Q8NBI5 491 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 TBC1D5Q92609 795 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 TBX21Q9UL17 535 aa23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 MRPL11Q9Y3B7 192 aaKnown RBP23.85■■□□□ 1.41
CHRNA3-207ENST00000559941 KLRF2D3W0D1 207 aa23.84■■□□□ 1.41
CHRNA3-207ENST00000559941 C9orf50Q5SZB4 431 aa23.84■■□□□ 1.41
CHRNA3-207ENST00000559941 MCF2L2Q86YR7 1114 aa23.84■■□□□ 1.41
CHRNA3-207ENST00000559941 RBM8AQ9Y5S9 174 aaKnown RBP23.84■■□□□ 1.41
CHRNA3-207ENST00000559941 KIAA1217Q5T5P2 1943 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 ERICH2A1L162 156 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 TIMP1P01033 207 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 FAM126BQ8IXS8 530 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 DEFB123Q8N688 67 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 SYTL5Q8TDW5 730 aaPredicted RBP23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 MTMR8Q96EF0 704 aa23.83■■□□□ 1.41
CHRNA3-207ENST00000559941 TLR3O15455 904 aaKnown RBP23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 GRM4Q14833 912 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 WTAPQ15007 396 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 SART3Q15020 963 aaKnown RBP23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 AMNQ9BXJ7 453 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 SEZ6LQ9BYH1 1024 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 SENP2Q9HC62 589 aa23.82■■□□□ 1.4
CHRNA3-207ENST00000559941 LAMA2P24043 3122 aaKnown RBP23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 NKRFO15226 690 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 CD4P01730 458 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 EPHB4P54760 987 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 ANTXR2P58335 489 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 FPGSQ05932 587 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 ITGA7Q13683 1181 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 CENPQQ7L2Z9 268 aaPredicted RBP23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 CHST3Q7LGC8 479 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 MB21D2Q8IYB1 491 aaPredicted RBP23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 TAAR1Q96RJ0 339 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 LSG1Q9H089 658 aaKnown RBP23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 COL20A1Q9P218 1284 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 GRIN2DO15399 1336 aa23.81■■□□□ 1.4
CHRNA3-207ENST00000559941 ZBTB5O15062 677 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 TROAPQ12815 778 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 PPP2R5BQ15173 497 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 MFSD5Q6N075 450 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 Q7L0L9 218 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 IGDCC4Q8TDY8 1250 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 NSUN6Q8TEA1 469 aaKnown RBP23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 ESYT1Q9BSJ8 1104 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 RIOX1Q9H6W3 641 aa23.8■■□□□ 1.4
CHRNA3-207ENST00000559941 PPP1R11O60927 126 aaPredicted RBP23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 CPT1AP50416 773 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 GHRHRQ02643 423 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 SLC35G1Q2M3R5 365 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 TMEM67Q5HYA8 995 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 OR6J1Q8NGC5 347 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms