RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MMP10P09238 476 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 CDC25AP30304 524 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 DNM2P50570 870 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 GOLGA8FQ08AF8 430 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 GOLGA8DPQ0D2H9 430 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 TMEM119Q4V9L6 283 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 JAKMIP3Q5VZ66 844 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 TTI2Q6NXR4 508 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 MOXD1Q6UVY6 613 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 CYP26C1Q6V0L0 522 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 RASGRP2Q7LDG7 609 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 IRF2BP1Q8IU81 584 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 ADGRF4Q8IZF3 695 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
SMAD3-212ENST00000559937 SUPT20HQ8NEM7 779 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 CUL5Q93034 780 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 P2RX5Q93086 422 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 TRIM47Q96LD4 638 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 MMTAG2Q9BU76 263 aaKnown RBP9.07□□□□□ -0.96
SMAD3-212ENST00000559937 CPVLQ9H3G5 476 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 KANSL2Q9H9L4 492 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 VAT1LQ9HCJ6 419 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 MAGEC2Q9UBF1 373 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-212ENST00000559937 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-212ENST00000559937 SERPINA10Q9UK55 444 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 ATRNL1Q5VV63 1379 aa9.07□□□□□ -0.96
SMAD3-212ENST00000559937 FRMPD2Q68DX3 1309 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 KDM3AQ9Y4C1 1321 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 H0YIN7 160 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 ENTPD3O75355 529 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 ZBTB7AO95365 584 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 FGFR1OPO95684 399 aaKnown RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 CASQ1P31415 396 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 CASP14P31944 242 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 CCT6AP40227 531 aaKnown RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 PTGER2P43116 358 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 SCNN1DP51172 638 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 TUBB4BP68371 445 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 ASIC1P78348 528 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 PDE4DQ08499 809 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 PSMD2Q13200 908 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 GRB10Q13322 594 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 CCDC96Q2M329 555 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 GRIPAP1Q4V328 841 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 FIGNQ5HY92 759 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 DACT2Q5SW24 774 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 HYIQ5T013 277 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 TATDN1Q6P1N9 297 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 TOGARAM2Q6ZUX3 1019 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 UNC13DQ70J99 1090 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 POTEDQ86YR6 584 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 C2CD5Q86YS7 1000 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 CNKSR1Q969H4 720 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 COA7Q96BR5 231 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 DUSP9Q99956 384 aaKnown RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 NUP58Q9BVL2 599 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 VPS16Q9H269 839 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 GPCPD1Q9NPB8 672 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 TMEM260Q9NX78 707 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 TAB2Q9NYJ8 693 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 MYO1AQ9UBC5 1043 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 PI4KBQ9UBF8 816 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 PPP1R1BQ9UD71 204 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-212ENST00000559937 LRWD1Q9UFC0 647 aa9.06□□□□□ -0.96
SMAD3-212ENST00000559937 EFCAB8A8MWE9 144 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 TECP42680 631 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMAD3-212ENST00000559937 USP11P51784 963 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 GNG11P61952 73 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 TRAF1Q13077 416 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 AP3B2Q13367 1082 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 KRT79Q5XKE5 535 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 RAD9BQ6WBX8 426 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 TMEM179Q6ZVK1 233 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 GUF1Q8N442 669 aaKnown RBP9.05□□□□□ -0.96
SMAD3-212ENST00000559937 MNS1Q8NEH6 495 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 ZNF507Q8TCN5 953 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 LRRC15Q8TF66 581 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 LARP4BQ92615 738 aaKnown RBP9.05□□□□□ -0.96
SMAD3-212ENST00000559937 RAD54LQ92698 747 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 CDK5RAP3Q96JB5 506 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 MBOAT7Q96N66 472 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 NT5C3AQ9H0P0 336 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 ABHD10Q9NUJ1 306 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 BLOC1S4Q9NUP1 217 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 CAPN11Q9UMQ6 739 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 ATF5Q9Y2D1 282 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-212ENST00000559937 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
SMAD3-212ENST00000559937 CYP3A7-CYP3A51PA0A087WV96 503 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TRIM49BA6NDI0 452 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 SOWAHDA6NJG2 315 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms