RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 LCHNA4D1U4 455 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 ZEB2O60315 1214 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 PFKMP08237 780 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 MCCP23508 829 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 TDO2P48775 406 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 TMEM31Q5JXX7 168 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 NEDD1Q8NHV4 660 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 STAG1Q8WVM7 1258 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 APPBP2Q92624 585 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 GMCL1Q96IK5 515 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 SYNPO2Q9UMS6 1093 aa18.57■□□□□ 0.56
AC243562.3-201ENST00000559866 MYL3P08590 195 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 IKQ13123 557 aaPredicted RBP18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 TKFCQ3LXA3 575 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 DUSP28Q4G0W2 176 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 NSMFQ6X4W1 530 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 HERC6Q8IVU3 1022 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 MIER1Q8N108 512 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 SLC9A7Q96T83 725 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 SEC62Q99442 399 aaKnown RBP18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 SEZ6LQ9BYH1 1024 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 VTA1Q9NP79 307 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 PRR12Q9ULL5 1215 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 COG5Q9UP83 839 aa18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 ARIH1Q9Y4X5 557 aaPredicted RBP18.56■□□□□ 0.56
AC243562.3-201ENST00000559866 NMT2O60551 498 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 IQCF3P0C7M6 154 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 FDX1P10109 184 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 TFAP4Q01664 338 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 TCTN1Q2MV58 587 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 NBPF20Q3BBV1 942 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 FAM160B2Q86V87 743 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 KBTBD3Q8NAB2 608 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 GDPD5Q8WTR4 605 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 HLA-CQ95604 372 aa18.55■□□□□ 0.56
AC243562.3-201ENST00000559866 NFIBO00712 420 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 TSPY3P0CV98 308 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 TSPY8P0CW00 308 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 SLC1A4P43007 532 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 ALDH5A1P51649 535 aaPredicted RBP18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 GPNMBQ14956 572 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 FAM47CQ5HY64 1035 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 COPS5Q92905 334 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 WDR11Q9BZH6 1224 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 INCENPQ9NQS7 918 aa18.54■□□□□ 0.56
AC243562.3-201ENST00000559866 RNF113AO15541 343 aaKnown RBP18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 GPR37L1O60883 481 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 SLC30A10Q6XR72 485 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 OR6J1Q8NGC5 347 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 CHURC1Q8WUH1 139 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 CTAGE1Q96RT6 745 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 IL17RBQ9NRM6 502 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 POLR3EQ9NVU0 708 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 ATG2AQ2TAZ0 1938 aa18.53■□□□□ 0.56
AC243562.3-201ENST00000559866 RBM47A0AV96 593 aaKnown RBP18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 FOXP2O15409 715 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 PLA2G6O60733 806 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 APPP05067 770 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 ACTN1P12814 892 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 DEFB103AP81534 67 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 PHOSPHO2Q8TCD6 241 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 MTG1Q9BT17 334 aaPredicted RBP18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 FTOQ9C0B1 505 aaKnown RBP eCLIP18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 ECHDC1Q9NTX5 307 aa18.52■□□□□ 0.56
AC243562.3-201ENST00000559866 PITPNM1O00562 1244 aa18.51■□□□□ 0.55
AC243562.3-201ENST00000559866 RFC2P35250 354 aa18.51■□□□□ 0.55
AC243562.3-201ENST00000559866 RCSD1Q6JBY9 416 aa18.51■□□□□ 0.55
AC243562.3-201ENST00000559866 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
AC243562.3-201ENST00000559866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
AC243562.3-201ENST00000559866 PATL2C9JE40 543 aaKnown RBP18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 PI4K2BG5E9Z4 385 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 ICAM1P05362 532 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 SLC16A2P36021 539 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 CPT1AP50416 773 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 PPARAQ07869 468 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 ZNF287Q9HBT7 754 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 STX8Q9UNK0 236 aa18.5■□□□□ 0.55
AC243562.3-201ENST00000559866 KIAA1217Q5T5P2 1943 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 ARIH2O95376 493 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 GNAT2P19087 354 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 CTDSPL2Q05D32 466 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 NFRKBQ6P4R8 1299 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 ALYREFQ86V81 257 aaKnown RBP18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 CLEC4DQ8WXI8 215 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 DHX38Q92620 1227 aaKnown RBP18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 GPATCH3Q96I76 525 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 MTUS1Q9ULD2 1270 aa18.49■□□□□ 0.55
AC243562.3-201ENST00000559866 BRWD1Q9NSI6 2320 aa18.48■□□□□ 0.55
AC243562.3-201ENST00000559866 PDE4BQ07343 736 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms