RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 AIFM3Q96NN9 605 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
HMG20A-209ENST00000559728 AMNQ9BXJ7 453 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 HOMER2Q9NSB8 354 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 SRRDQ9UH36 339 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 SLC15A5A6NIM6 579 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 POTEB2H3BUK9 544 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 STXBP3O00186 592 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 PGK2P07205 417 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 HOXC6P09630 235 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 ADORA2AP29274 412 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 COPB2P35606 906 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 FLT3LGP49771 235 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 PFKFB3Q16875 520 aaPredicted RBP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 ZNF792Q3KQV3 632 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 CCDC83Q8IWF9 413 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 RGS22Q8NE09 1264 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 SLC26A6Q9BXS9 759 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 RNF26Q9BY78 433 aaPredicted RBP10.46□□□□□ -0.73
HMG20A-209ENST00000559728 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 FLRT1Q9NZU1 646 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 COL20A1Q9P218 1284 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 PTPN22Q9Y2R2 807 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 TRIM17Q9Y577 477 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 ABCB11O95342 1321 aa10.46□□□□□ -0.73
HMG20A-209ENST00000559728 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 MEIS2O14770 477 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 STRNO43815 780 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 ST18O60284 1047 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 GNRH1P01148 92 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 FCER1AP12319 257 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 HSD17B4P51659 736 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 CNTN2Q02246 1040 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 IRF5Q13568 498 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 CUL4AQ13619 759 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 BAATQ14032 418 aaPredicted RBP10.45□□□□□ -0.74
HMG20A-209ENST00000559728 NPY5RQ15761 445 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 CCL14Q16627 93 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 FAM133AQ8N9E0 248 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 SNX21Q969T3 373 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 MMP19Q99542 508 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 SH2B1Q9NRF2 756 aaPredicted RBP10.45□□□□□ -0.74
HMG20A-209ENST00000559728 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 FBXO40Q9UH90 709 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
HMG20A-209ENST00000559728 PTCH2Q9Y6C5 1203 aa10.45□□□□□ -0.74
HMG20A-209ENST00000559728 DDX49Q9Y6V7 483 aaKnown RBP10.45□□□□□ -0.74
HMG20A-209ENST00000559728 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 PTPDC1A2A3K4 754 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 SCG2P13521 617 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 MCM2P49736 904 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 RPS6P62753 249 aaKnown RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 TRIM32Q13049 653 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 KIF22Q14807 665 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 COL13A1Q5TAT6 717 aaPredicted RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 SYTL5Q8TDW5 730 aaPredicted RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 SOCS4Q8WXH5 440 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 TRIB2Q92519 343 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 MAML3Q96JK9 1138 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 NUDT12Q9BQG2 462 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 GJB4Q9NTQ9 266 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 PNMA2Q9UL42 364 aa10.44□□□□□ -0.74
HMG20A-209ENST00000559728 MRPL11Q9Y3B7 192 aaKnown RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 COL11A1P12107 1806 aaPredicted RBP10.44□□□□□ -0.74
HMG20A-209ENST00000559728 ZNF236Q9UL36 1845 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 CYP2B6P20813 491 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
HMG20A-209ENST00000559728 PRMT2P55345 433 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 SSRP1Q08945 709 aaKnown RBP10.43□□□□□ -0.74
HMG20A-209ENST00000559728 KCTD2Q14681 263 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 NSMFQ6X4W1 530 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 RNF207Q6ZRF8 634 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 ANKRD35Q8N283 1001 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 APBA2Q99767 749 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
HMG20A-209ENST00000559728 MAF1Q9H063 256 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 VPS54Q9P1Q0 977 aa10.43□□□□□ -0.74
HMG20A-209ENST00000559728 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
HMG20A-209ENST00000559728 DIS3Q9Y2L1 958 aaKnown RBP10.43□□□□□ -0.74
HMG20A-209ENST00000559728 PFASO15067 1338 aa10.42□□□□□ -0.74
HMG20A-209ENST00000559728 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
HMG20A-209ENST00000559728 ESYT2A0FGR8 921 aa10.42□□□□□ -0.74
HMG20A-209ENST00000559728 hCG_1984214I3L0E3 225 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms