RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MAMDC4Q6UXC1 1216 aa23.45■■□□□ 1.34
TSPAN3-207ENST00000559494 MCF2L2Q86YR7 1114 aa23.45■■□□□ 1.34
TSPAN3-207ENST00000559494 MAF1Q9H063 256 aa23.45■■□□□ 1.34
TSPAN3-207ENST00000559494 RPTORQ8N122 1335 aa23.45■■□□□ 1.34
TSPAN3-207ENST00000559494 LCTP09848 1927 aa23.44■■□□□ 1.34
TSPAN3-207ENST00000559494 NOL8Q76FK4 1167 aaKnown RBP23.44■■□□□ 1.34
TSPAN3-207ENST00000559494 TRPV1Q8NER1 839 aa23.44■■□□□ 1.34
TSPAN3-207ENST00000559494 RNF208Q9H0X6 261 aa23.44■■□□□ 1.34
TSPAN3-207ENST00000559494 MCM3APO60318 1980 aa23.44■■□□□ 1.34
TSPAN3-207ENST00000559494 PFKFB2O60825 505 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 SNAI1O95863 264 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 CFBP00751 764 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 IFNAR1P17181 557 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 CCND3P30281 292 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 GHRHRQ02643 423 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 SCRN1Q12765 414 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 ME3Q16798 604 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 MSL3Q8N5Y2 521 aaKnown RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 SYTL5Q8TDW5 730 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 PHKBQ93100 1093 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 SLKQ9H2G2 1235 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 HMX1Q9NP08 348 aaPredicted RBP23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 COL20A1Q9P218 1284 aa23.43■■□□□ 1.34
TSPAN3-207ENST00000559494 PRPF3O43395 683 aaKnown RBP23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 PPFIA3O75145 1194 aa23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 LARGE1O95461 756 aa23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 HSD17B4P51659 736 aa23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 GPKOWQ92917 476 aaPredicted RBP eCLIP23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 TAAR1Q96RJ0 339 aa23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 TMEM106CQ9BVX2 250 aa23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 DDX49Q9Y6V7 483 aaKnown RBP23.42■■□□□ 1.34
TSPAN3-207ENST00000559494 CYBAP13498 195 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 RABEP1Q15276 862 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 PKN1Q16512 942 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 WWC2Q6AWC2 1192 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 HEATR3Q7Z4Q2 680 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 SAMD3Q8N6K7 520 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.41■■□□□ 1.344e-7■■■□□ 14.7
TSPAN3-207ENST00000559494 PAK6Q9NQU5 681 aaPredicted RBP23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 SYNGAP1Q96PV0 1343 aa23.41■■□□□ 1.34
TSPAN3-207ENST00000559494 POTEFA5A3E0 1075 aa23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 ALDH5A1P51649 535 aaPredicted RBP23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 PFKFB3Q16875 520 aaPredicted RBP23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 ARMCX2Q7L311 632 aa23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 NECAB1Q8N987 351 aa23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 SLC26A6Q9BXS9 759 aa23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 MAP3K20Q9NYL2 800 aaKnown RBP23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 ADD3Q9UEY8 706 aaKnown RBP23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 BRCA2P51587 3418 aa23.4■■□□□ 1.34
TSPAN3-207ENST00000559494 ASB14A6NK59 587 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 GCOM1H8Y6P7 765 aaPredicted RBP23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 GJB1P08034 283 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 POLR2MP0CAP2 368 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 HOXA13P31271 388 aaPredicted RBP23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 SOX10P56693 466 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 TYW1BQ6NUM6 668 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 DNERQ8NFT8 737 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 MORC4Q8TE76 937 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 RNF26Q9BY78 433 aaPredicted RBP23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 LIMCH1Q9UPQ0 1083 aa23.39■■□□□ 1.34
TSPAN3-207ENST00000559494 STXBP3O00186 592 aa23.38■■□□□ 1.33
TSPAN3-207ENST00000559494 CPLX1O14810 134 aa23.38■■□□□ 1.33
TSPAN3-207ENST00000559494 ZNF865P0CJ78 1059 aaPredicted RBP23.38■■□□□ 1.33
TSPAN3-207ENST00000559494 DEFB118Q96PH6 123 aa23.38■■□□□ 1.33
TSPAN3-207ENST00000559494 NRBP1Q9UHY1 535 aa23.38■■□□□ 1.33
TSPAN3-207ENST00000559494 MEIS2O14770 477 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 DTNBO60941 627 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 CAPN15O75808 1086 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 CTDNEP1O95476 244 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 SCG2P13521 617 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 CNGA1P29973 690 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 AKAP17AQ02040 695 aaKnown RBP23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 SSRP1Q08945 709 aaKnown RBP23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 KATNBL1Q9H079 304 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 PSTPIP2Q9H939 334 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 RBM27Q9P2N5 1060 aaKnown RBP23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
TSPAN3-207ENST00000559494 LOC102724159A0A0B4J2E5 919 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 SGPL1O95470 568 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 EN2P19622 333 aaPredicted RBP23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 EDNRBP24530 442 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 ACVR2BQ13705 512 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 PWP2Q15269 919 aaKnown RBP23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 LHX8Q68G74 356 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 CPLX2Q6PUV4 134 aaKnown RBP23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 USP17L6PQ6QN14 398 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 GTF3C6Q969F1 213 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 RMDN3Q96TC7 470 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 ABHD16BQ9H3Z7 469 aa23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 RBBP6Q7Z6E9 1792 aaKnown RBP23.36■■□□□ 1.33
TSPAN3-207ENST00000559494 hCG_1984214I3L0E3 225 aa23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 GJA8P48165 433 aa23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 NAPAP54920 295 aa23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 ST3GAL1Q11201 340 aa23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 FCHSD1Q86WN1 690 aa23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 ZNF713Q8N859 430 aaPredicted RBP23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 NSUN6Q8TEA1 469 aaKnown RBP23.35■■□□□ 1.33
TSPAN3-207ENST00000559494 U2AF1L4Q8WU68 220 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms