RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ANAPC4Q9UJX5 808 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 TRANK1O15050 2925 aa6.88□□□□□ -1.31
USP3-212ENST00000559276 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
USP3-212ENST00000559276 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.87□□□□□ -1.31
USP3-212ENST00000559276 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.87□□□□□ -1.31
USP3-212ENST00000559276 FDX1P10109 184 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 ACRP10323 421 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 FOSL2P15408 326 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 MX1P20591 662 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 CYP2C18P33260 490 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 SLC1A4P43007 532 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 STAT2P52630 851 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PDE4BQ07343 736 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 CSPP1Q1MSJ5 1256 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 FAM160B2Q86V87 743 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PCSK9Q8NBP7 692 aaKnown RBP6.87□□□□□ -1.31
USP3-212ENST00000559276 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 GLT1D1Q96MS3 346 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 FSD1Q9BTV5 496 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PANK2Q9BZ23 570 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 NAPBQ9H115 298 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 PRDM6Q9NQX0 595 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 CYP39A1Q9NYL5 469 aa6.87□□□□□ -1.31
USP3-212ENST00000559276 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
USP3-212ENST00000559276 MROH7Q68CQ1 1323 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 A0A0D9SFI3 127 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 NFIBO00712 420 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 ORC4O43929 436 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 ALAS1P13196 640 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 NASPP49321 788 aaPredicted RBP6.86□□□□□ -1.31
USP3-212ENST00000559276 PSMC6P62333 389 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 TNFAIP2Q03169 654 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 ADGRE1Q14246 886 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 ALX1Q15699 326 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 FSCN1Q16658 493 aaKnown RBP6.86□□□□□ -1.31
USP3-212ENST00000559276 TKFCQ3LXA3 575 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 BTNL9Q6UXG8 535 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 ZNF365Q70YC5 407 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 TLK2Q86UE8 772 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 FBXO16Q8IX29 292 aaPredicted RBP6.86□□□□□ -1.31
USP3-212ENST00000559276 CHURC1Q8WUH1 139 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 NACAP1Q9BZK3 213 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 TRPV6Q9H1D0 765 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 WNT8AQ9H1J5 351 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 RANBP17Q9H2T7 1088 aaKnown RBP6.86□□□□□ -1.31
USP3-212ENST00000559276 STX8Q9UNK0 236 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
USP3-212ENST00000559276 RBM47A0AV96 593 aaKnown RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 ASB14A6NK59 587 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 ERC2O15083 957 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 DYNC1LI2O43237 492 aaPredicted RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 B4GALT4O60513 344 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 OFD1O75665 1012 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 FGAP02671 866 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 ICAM1P05362 532 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 SLC16A2P36021 539 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 MCM2P49736 904 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 PDE1AP54750 535 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 PPIGQ13427 754 aaKnown RBP eCLIP6.85□□□□□ -1.314e-6■■■■□ 19.4
USP3-212ENST00000559276 ITGA7Q13683 1181 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 CASC1Q6TDU7 716 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 ZNF589Q86UQ0 364 aaPredicted RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 HERVK_113Q902F9 699 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 TIFAQ96CG3 184 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 KIF2CQ99661 725 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 NOC4LQ9BVI4 516 aaKnown RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 GZF1Q9H116 711 aaPredicted RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 IL23AQ9NPF7 189 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 TCP11L1Q9NUJ3 509 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 YBX2Q9Y2T7 364 aaKnown RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 Q9Y3F1 56 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 CTDP1Q9Y5B0 961 aaPredicted RBP6.85□□□□□ -1.31
USP3-212ENST00000559276 SCN10AQ9Y5Y9 1956 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 PTPRSQ13332 1948 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
USP3-212ENST00000559276 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
USP3-212ENST00000559276 TANC1Q9C0D5 1861 aa6.84□□□□□ -1.31
USP3-212ENST00000559276 EPB41L2O43491 1005 aaKnown RBP6.84□□□□□ -1.31
USP3-212ENST00000559276 ZNF500O60304 480 aaPredicted RBP6.84□□□□□ -1.31
USP3-212ENST00000559276 RANBP6O60518 1105 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms