RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 SLC4A7Q9Y6M7 1214 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
CDC42BPB-205ENST00000559245 ICAM1P05362 532 aa19.23■□□□□ 0.67
CDC42BPB-205ENST00000559245 DUSP28Q4G0W2 176 aa19.23■□□□□ 0.67
CDC42BPB-205ENST00000559245 PPP2R2DQ66LE6 453 aa19.23■□□□□ 0.67
CDC42BPB-205ENST00000559245 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
CDC42BPB-205ENST00000559245 ALDH8A1Q9H2A2 487 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-205ENST00000559245 TET1Q8NFU7 2136 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 ZBBXA8MT70 800 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 FOXP2O15409 715 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 MYOGP15173 224 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 UHRF1Q96T88 793 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 POLR3EQ9NVU0 708 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 ADD3Q9UEY8 706 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
CDC42BPB-205ENST00000559245 RANBP6O60518 1105 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 BAATQ14032 418 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 OTUD7AQ8TE49 926 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 DCAF4Q8WV16 495 aa19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 WDR11Q9BZH6 1224 aa19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 TRMT13Q9NUP7 481 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-205ENST00000559245 PTPRSQ13332 1948 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 SUPT20HL2P0C7V6 817 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 CYP2C9P11712 490 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 ATP2A2P16615 1042 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 SLC16A2P36021 539 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 NOVP48745 357 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 PURAQ00577 322 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 TTLL4Q14679 1199 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 TSPYL2Q9H2G4 693 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 TNKSO95271 1327 aa19.2■□□□□ 0.66
CDC42BPB-205ENST00000559245 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 NFIBO00712 420 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 PFKMP08237 780 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 MYL3P08590 195 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 CPT1AP50416 773 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 BTNL9Q6UXG8 535 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 MYH6P13533 1939 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 XIRP2A4UGR9 3374 aa19.19■□□□□ 0.66
CDC42BPB-205ENST00000559245 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 RBM47A0AV96 593 aaKnown RBP19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 PTPDC1A2A3K4 754 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 ORC4O43929 436 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 VPS53Q5VIR6 699 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 SYDE2Q5VT97 1194 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 OR6J1Q8NGC5 347 aa19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 MTG1Q9BT17 334 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPB-205ENST00000559245 MX1P20591 662 aa19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 TMEM67Q5HYA8 995 aa19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 GPHNQ9NQX3 736 aaPredicted RBP19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 RAPGEFL1Q9UHV5 662 aa19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 FRMPD2Q68DX3 1309 aaPredicted RBP19.17■□□□□ 0.66
CDC42BPB-205ENST00000559245 CA3P07451 260 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 FGRP09769 529 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 TOP1P11387 765 aaKnown RBP19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 ACTN1P12814 892 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 CALML3P27482 149 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 NBPF20Q3BBV1 942 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 FAM47CQ5HY64 1035 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 SLC30A10Q6XR72 485 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 TMEM47Q9BQJ4 181 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
CDC42BPB-205ENST00000559245 MYH7BA7E2Y1 1941 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 RFXAPO00287 272 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 BMP1P13497 986 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 RFC2P35250 354 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 TFF2Q03403 129 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 BRDTQ58F21 947 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 RRP12Q5JTH9 1297 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 RNF207Q6ZRF8 634 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 PPP1R13LQ8WUF5 828 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 CLEC4DQ8WXI8 215 aa19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 NECAB3Q96P71 396 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-205ENST00000559245 NKRFO15226 690 aaKnown RBP eCLIP19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 PDE4DQ08499 809 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 SKIV2LQ15477 1246 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 ALX1Q15699 326 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 SLC9A7Q96T83 725 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 MPHOSPH6Q99547 160 aaKnown RBP19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 CERS4Q9HA82 394 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 TCP11L1Q9NUJ3 509 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 MTCH2Q9Y6C9 303 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 RAD50Q92878 1312 aa19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 COL4A4P53420 1690 aaPredicted RBP19.14■□□□□ 0.65
CDC42BPB-205ENST00000559245 PITPNM1O00562 1244 aa19.13■□□□□ 0.65
CDC42BPB-205ENST00000559245 GTPBP6O43824 516 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPB-205ENST00000559245 KPNA6O60684 536 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms