RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 KRT79Q5XKE5 535 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 CNNM4Q6P4Q7 775 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 KCTD1Q719H9 257 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 TMEM139Q8IV31 216 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 RTKN2Q8IZC4 609 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 EXOC1Q9NV70 894 aa12.67□□□□□ -0.38
CLPX-204ENST00000559152 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 TRAF1Q13077 416 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 KRT31Q15323 416 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 PVALEFA0A1B0GWK0 134 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 MARCH6O60337 910 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 PPP1R11O60927 126 aaPredicted RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 SLC16A2P36021 539 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 USP11P51784 963 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 CACNB3P54284 484 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 SH3BP5LQ7L8J4 393 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 FAM114A1Q8IWE2 563 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 PLIN2Q99541 437 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 VPS33BQ9H267 617 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 HERC5Q9UII4 1024 aaKnown RBP12.66□□□□□ -0.38
CLPX-204ENST00000559152 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
CLPX-204ENST00000559152 UTRNP46939 3433 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 TEX33O43247 280 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 ASIC1P78348 528 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 PDE4DQ08499 809 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
CLPX-204ENST00000559152 PPP2R2CQ9Y2T4 447 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 PCDHA1Q9Y5I3 950 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 SLX4Q8IY92 1834 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 F5H6K3 240 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 TDP2O95551 362 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 KLRC3Q07444 240 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 RBL2Q08999 1139 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 SEPT2Q15019 361 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 QRICH1Q2TAL8 776 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 PSMD1Q99460 953 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
CLPX-204ENST00000559152 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
CLPX-204ENST00000559152 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
CLPX-204ENST00000559152 SLC37A4O43826 429 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 RAD21O60216 631 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 MFAP3LO75121 409 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 CCNE1P24864 410 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 SYT10Q6XYQ8 523 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 LARP4BQ92615 738 aaKnown RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 MAPK8IP1Q9UQF2 711 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 FOSP01100 380 aaPredicted RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 CCDC175P0C221 793 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 PSMD2Q13200 908 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 GRB10Q13322 594 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 UBE2SQ16763 222 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 SNX29Q8TEQ0 813 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 P2RX5Q93086 422 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
CLPX-204ENST00000559152 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
CLPX-204ENST00000559152 CYP3A7-CYP3A51PA0A087WV96 503 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 C21orf2O43822 256 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
CLPX-204ENST00000559152 FGFR1OPO95684 399 aaKnown RBP12.63□□□□□ -0.39
CLPX-204ENST00000559152 CYP3A7P24462 503 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 GOLGA8FQ08AF8 430 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 GOLGA8DPQ0D2H9 430 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 TMTC1Q8IUR5 882 aa12.63□□□□□ -0.39
CLPX-204ENST00000559152 SLFN12Q8IYM2 578 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms