RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
SPG11-213ENST00000558988 ECE1P42892 770 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 KCNJ4P48050 445 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 GCKRQ14397 625 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 SLC4A10Q6U841 1118 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 CDC37L1Q7L3B6 337 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 C2CD4AQ8NCU7 369 aaPredicted RBP9.3□□□□□ -0.92
SPG11-213ENST00000558988 LRRN4CLQ8ND94 238 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 DCPSQ96C86 337 aaKnown RBP9.3□□□□□ -0.92
SPG11-213ENST00000558988 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 MYH16Q9H6N6 1097 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 GGA3Q9NZ52 723 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 PODXL2Q9NZ53 605 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 SCAF8Q9UPN6 1271 aaKnown RBP9.3□□□□□ -0.92
SPG11-213ENST00000558988 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
SPG11-213ENST00000558988 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
SPG11-213ENST00000558988 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
SPG11-213ENST00000558988 LINS1Q8NG48 757 aa9.29□□□□□ -0.92
SPG11-213ENST00000558988 MXD3Q9BW11 206 aa9.29□□□□□ -0.92
SPG11-213ENST00000558988 MINPP1Q9UNW1 487 aa9.29□□□□□ -0.92
SPG11-213ENST00000558988 TSPAN15O95858 294 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 DLGAP3O95886 979 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 CYP2E1P05181 493 aaPredicted RBP9.28□□□□□ -0.92
SPG11-213ENST00000558988 VIL1P09327 827 aaKnown RBP9.28□□□□□ -0.92
SPG11-213ENST00000558988 KLRK1P26718 216 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 CCT4P50991 539 aaKnown RBP9.28□□□□□ -0.92
SPG11-213ENST00000558988 HUNKP57058 714 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 C19orf57Q0VDD7 668 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 TAF7LQ5H9L4 462 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 SAPCD2Q86UD0 394 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 DPF2Q92785 391 aa9.28□□□□□ -0.92
SPG11-213ENST00000558988 POLR2AP24928 1970 aaKnown RBP9.28□□□□□ -0.92
SPG11-213ENST00000558988 ANKRD18BA2A2Z9 1011 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 SNAP23O00161 211 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 PLIN1O60240 522 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 CD8BP10966 210 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
SPG11-213ENST00000558988 ARL4DP49703 201 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 MLANAQ16655 118 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 ANGEL2Q5VTE6 544 aaKnown RBP9.27□□□□□ -0.93
SPG11-213ENST00000558988 NCAPG2Q86XI2 1143 aa9.27□□□□□ -0.93
SPG11-213ENST00000558988 TAF5LO75529 589 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 CASP7P55210 303 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 DPYDQ12882 1025 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
SPG11-213ENST00000558988 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
SPG11-213ENST00000558988 C2orf69Q8N8R5 385 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 AGBL3Q8NEM8 1001 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 CDCA5Q96FF9 252 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 YIPF2Q9BWQ6 316 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 GBA2Q9HCG7 927 aaPredicted RBP9.26□□□□□ -0.93
SPG11-213ENST00000558988 MYOZ2Q9NPC6 264 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 C9orf78Q9NZ63 289 aaPredicted RBP9.26□□□□□ -0.93
SPG11-213ENST00000558988 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 ZNF804BA4D1E1 1349 aa9.26□□□□□ -0.93
SPG11-213ENST00000558988 MED23Q9ULK4 1368 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 LOC100289279A0A1B0GTE1 492 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 SASH1O94885 1247 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 WEE1P30291 646 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 CHRNDQ07001 517 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 PRAMEF18Q5VWM3 479 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 LMBR1LQ6UX01 489 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 KIAA0825Q8IV33 1275 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 ANKRD2Q9GZV1 360 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 PRDM10Q9NQV6 1147 aa9.25□□□□□ -0.93
SPG11-213ENST00000558988 CACNA1FO60840 1977 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 POM121CA8CG34 1229 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 F8W031 263 aaPredicted RBP9.24□□□□□ -0.93
SPG11-213ENST00000558988 GRM8O00222 908 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 NFICP08651 508 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 ZNF157P51786 506 aaPredicted RBP9.24□□□□□ -0.93
SPG11-213ENST00000558988 ZNF280AP59817 542 aaPredicted RBP9.24□□□□□ -0.93
SPG11-213ENST00000558988 FOXO4P98177 505 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 MCM6Q14566 821 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 CCDC57Q2TAC2 916 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 NBPF9Q3BBW0 867 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 EPHA10Q5JZY3 1008 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 COX20Q5RI15 118 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 PI4K2BQ8TCG2 481 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 MISP3Q96FF7 219 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 PLA2G12BQ9BX93 195 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 COA1Q9GZY4 146 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 CNNM1Q9NRU3 951 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
SPG11-213ENST00000558988 ZNF503-AS2A6NEH8 195 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 CSF1RP07333 972 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 MAP2K2P36507 400 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 SOX4Q06945 474 aaPredicted RBP9.23□□□□□ -0.93
SPG11-213ENST00000558988 PRKG1Q13976 671 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 EXOSC6Q5RKV6 272 aaKnown RBP9.23□□□□□ -0.93
SPG11-213ENST00000558988 DACT2Q5SW24 774 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 TTLL5Q6EMB2 1281 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms