RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 FLT3LGP49771 235 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 RPS6P62753 249 aaKnown RBP14.3□□□□□ -0.12
GABPB1-208ENST00000558970 CNTN2Q02246 1040 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 GRB14Q14449 540 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 NOM1Q5C9Z4 860 aaKnown RBP14.3□□□□□ -0.12
GABPB1-208ENST00000558970 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 FCHSD1Q86WN1 690 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 NUDT12Q9BQG2 462 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
GABPB1-208ENST00000558970 CYP39A1Q9NYL5 469 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 COBLO75128 1261 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 ADCY7P51828 1080 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 NLRP5P59047 1200 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 UBXN2AP68543 259 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 TRAF1Q13077 416 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 MORN1Q5T089 497 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 CTU1Q7Z7A3 348 aaKnown RBP14.29□□□□□ -0.12
GABPB1-208ENST00000558970 MCF2L2Q86YR7 1114 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 CUL5Q93034 780 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 COL20A1Q9P218 1284 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
GABPB1-208ENST00000558970 PFASO15067 1338 aa14.29□□□□□ -0.12
GABPB1-208ENST00000558970 POTEB2H3BUK9 544 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 STRNO43815 780 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 ELNP15502 786 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 HOXD10P28358 340 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 RGS2P41220 211 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 CUL4AQ13619 759 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 TRIM29Q14134 588 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 ARHGEF6Q15052 776 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 PKN2Q16513 984 aaKnown RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 CCL14Q16627 93 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 CCDC148Q8NFR7 591 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 RAET1EQ8TD07 263 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 CCDC12Q8WUD4 166 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 SOCS4Q8WXH5 440 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 WASF1Q92558 559 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-208ENST00000558970 GJD2Q9UKL4 321 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 PTCH2Q9Y6C5 1203 aa14.28□□□□□ -0.12
GABPB1-208ENST00000558970 KIAA1217Q5T5P2 1943 aa14.27□□□□□ -0.12
GABPB1-208ENST00000558970 MYCP01106 439 aaPredicted RBP14.27□□□□□ -0.13
GABPB1-208ENST00000558970 XBP1P17861 261 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
GABPB1-208ENST00000558970 BECN1Q14457 450 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 PPP1R18Q6NYC8 613 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.13
GABPB1-208ENST00000558970 C8orf76Q96K31 380 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 APBA2Q99767 749 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 C6orf50Q9HD87 102 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 RIC8AQ9NPQ8 531 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 FLRT1Q9NZU1 646 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 DOCK5Q9H7D0 1870 aa14.27□□□□□ -0.13
GABPB1-208ENST00000558970 CENPFP49454 3210 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 SOWAHBA6NEL2 793 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 MEIS2O14770 477 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
GABPB1-208ENST00000558970 HSD17B4P51659 736 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 KRT40Q6A162 431 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 ABRAQ8N0Z2 381 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
GABPB1-208ENST00000558970 HTTP42858 3142 aa14.26□□□□□ -0.13
GABPB1-208ENST00000558970 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
GABPB1-208ENST00000558970 ASTN1O14525 1302 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 DNAJC25-GNG10A0A024R161 153 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 ADCY3O60266 1144 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 GNRH1P01148 92 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
GABPB1-208ENST00000558970 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
GABPB1-208ENST00000558970 TRIM32Q13049 653 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 ZNF792Q3KQV3 632 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
GABPB1-208ENST00000558970 ARHGEF16Q5VV41 709 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 EEPD1Q7L9B9 569 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
GABPB1-208ENST00000558970 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 OXER1Q8TDS5 423 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 USP6NLQ92738 828 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 FGD4Q96M96 766 aa14.25□□□□□ -0.13
GABPB1-208ENST00000558970 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms