RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 NUP133Q8WUM0 1156 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 TSC1Q92574 1164 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 JAKMIP2Q96AA8 810 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 DHX58Q96C10 678 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 PAGE5Q96GU1 130 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CLIC6Q96NY7 704 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 OSBPL9Q96SU4 736 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 UBXN6Q9BZV1 441 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 CSRNP2Q9H175 543 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 GLT8D2Q9H1C3 349 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 HSD3B7Q9H2F3 369 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 UNC45AQ9H3U1 944 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 KAT14Q9H8E8 782 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ARMT1Q9H993 441 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 RNF14Q9UBS8 474 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 MCM8Q9UJA3 840 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 RAB21Q9UL25 225 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF232Q9UNY5 417 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 LUC7L2Q9Y383 392 aaKnown RBP6.11□□□□□ -1.43
GABPB1-207ENST00000558335 FHOD1Q9Y613 1164 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ADGRG1Q9Y653 693 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 STK24Q9Y6E0 443 aa6.11□□□□□ -1.43
GABPB1-207ENST00000558335 ATXN2Q99700 1313 aaKnown RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 CCDC194A0A1B0GVG4 234 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 A0A1W2PQJ5 194 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 MINDY4BA8MYZ0 360 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 NPHP1O15259 732 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 OPA1O60313 960 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 ERLIN2O94905 339 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 RTN3O95197 1032 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 OATP04181 439 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 PBX1P40424 430 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 UBA7P41226 1012 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 STAT6P42226 847 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 TOB1P50616 345 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 CTDSPL2Q05D32 466 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 ITIH3Q06033 890 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 IFT88Q13099 833 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 CUL4BQ13620 913 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 COL9A3Q14050 684 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 KRT72Q14CN4 511 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 SPA17Q15506 151 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 PFKFB3Q16875 520 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 PREPLQ4J6C6 727 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 TCP11X2Q5H9J9 407 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 SOGA3Q5TF21 947 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 CNNM4Q6P4Q7 775 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 TMTC3Q6ZXV5 915 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 TMEM139Q8IV31 216 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 TRIM42Q8IWZ5 723 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 FNBP4Q8N3X1 1017 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 RASSF8Q8NHQ8 419 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 ANKS1AQ92625 1134 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 SYMPKQ92797 1274 aaKnown RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 PPP1R14BQ96C90 147 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 AGBL1Q96MI9 1066 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 SLX1AQ9BQ83 275 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 CCSER1Q9C0I3 900 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 GPHNQ9NQX3 736 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-207ENST00000558335 RGL1Q9NZL6 768 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 SWAP70Q9UH65 585 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 PCDHB6Q9Y5E3 794 aa6.1□□□□□ -1.43
GABPB1-207ENST00000558335 A0A1B0GUL6 1792 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 CASZ1Q86V15 1759 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 DOT1LQ8TEK3 1739 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 TESPA1A2RU30 521 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-207ENST00000558335 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 LGALS16A8MUM7 142 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 PSMD14O00487 310 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 GALR2O43603 387 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-207ENST00000558335 AHCYL1O43865 530 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 CEP104O60308 925 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 RTN2O75298 545 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 PPFIA4O75335 1185 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 RPN1P04843 607 aaKnown RBP6.09□□□□□ -1.43
GABPB1-207ENST00000558335 FAM163BP0C2L3 166 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 PRLRP16471 622 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 GJA8P48165 433 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 COPB1P53618 953 aaKnown RBP6.09□□□□□ -1.43
GABPB1-207ENST00000558335 APBA1Q02410 837 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 RBL2Q08999 1139 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 TROAPQ12815 778 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 PTGDRQ13258 359 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 KCNJ12Q14500 433 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 HLFQ16534 295 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 LONRF2Q1L5Z9 754 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 TMEM266Q2M3C6 531 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 SLC4A8Q2Y0W8 1093 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 ZNF569Q5MCW4 686 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 SLC10A5Q5PT55 438 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 RRAGBQ5VZM2 374 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 TTC19Q6DKK2 380 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-207ENST00000558335 KRT25Q7Z3Z0 450 aa6.09□□□□□ -1.43
GABPB1-207ENST00000558335 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms