RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 AATFQ9NY61 560 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 STIM2Q9P246 746 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 RREB1Q92766 1687 aa5.63□□□□□ -1.51
HMG20A-204ENST00000558288 ANO9A1A5B4 782 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PRDM1O75626 825 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PPP1R37O75864 691 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 IFNAR1P17181 557 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SKOR1P84550 965 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 WTAPQ15007 396 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 DZIP3Q86Y13 1208 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SMC1BQ8NDV3 1235 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 IGDCC4Q8TDY8 1250 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 STAG1Q8WVM7 1258 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 ALS2CR12Q96Q35 445 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TACO1Q9BSH4 297 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SLC52A2Q9HAB3 445 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 MLXIPQ9HAP2 919 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 NFU1Q9UMS0 254 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SNX12Q9UMY4 172 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SBF2Q86WG5 1849 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 A0A1B0GUA9 196 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 G3V3G9 751 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 NCK2O43639 380 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 GCFC2P16383 781 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 LMNB1P20700 586 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SMTNP53814 917 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 RNASE9P60153 205 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 GUCY2DQ02846 1103 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PTGISQ16647 500 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 DCAF8Q5TAQ9 597 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 KRT26Q7Z3Y9 468 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TICAM2Q86XR7 235 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PARP9Q8IXQ6 854 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 ANKRD13CQ8N6S4 541 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM58Q8NG06 486 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PLBD2Q8NHP8 589 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TBC1D31Q96DN5 1066 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 IFIH1Q9BYX4 1025 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 A1CFQ9NQ94 594 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 HAUS2Q9NVX0 235 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 NIP7Q9Y221 180 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 HEG1Q9ULI3 1381 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF532Q9HCE3 1301 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 STK36Q9NRP7 1315 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 DOT1LQ8TEK3 1739 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 BACH1O14867 736 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PPP1R12BO60237 982 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 DDNO94850 711 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 RPN1P04843 607 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 BRD2P25440 801 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 CALRP27797 417 aaKnown RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 KRT2P35908 639 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 PRCPP42785 496 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 KLK7P49862 253 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TBC1D8BQ0IIM8 1120 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 SF3A3Q12874 501 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TYW1BQ6NUM6 668 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 WDR59Q6PJI9 974 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 MFSD6Q6ZSS7 791 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 IFT20Q8IY31 132 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 MMGT1Q8N4V1 131 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 MYCBPAPQ8TBZ2 947 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 JDP2Q8WYK2 163 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 TSGA10Q9BZW7 698 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 EPB41L5Q9HCM4 733 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 RMND1Q9NWS8 449 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 CAPN6Q9Y6Q1 641 aa5.62□□□□□ -1.51
HMG20A-204ENST00000558288 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-204ENST00000558288 XDHP47989 1333 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 LGALS16A8MUM7 142 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 AKR1B10O60218 316 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 MCM7P33993 719 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 MTIF2P46199 727 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 METTL24Q5JXM2 366 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 COL13A1Q5TAT6 717 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF658Q5TYW1 1059 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TEX11Q8IYF3 940 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 OSBPL9Q96SU4 736 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PLIN2Q99541 437 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 DNAJC7Q99615 494 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TAOK3Q9H2K8 898 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CAPN11Q9UMQ6 739 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 HYOU1Q9Y4L1 999 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 C4AP0C0L4 1744 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 C4BP0C0L5 1744 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ANKRD18BA2A2Z9 1011 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ZSCAN5CA6NGD5 496 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 LRRC10BA6NIK2 292 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 H7C1D1 291 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 SKAP2O75563 359 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 HEXIM1O94992 359 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FAM153BP0C7A2 387 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 EPB41P11171 864 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PDE6BP35913 854 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 MDH1P40925 334 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms