RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ARMCX2Q7L311 632 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 DDX12PQ92771 950 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 FGD4Q96M96 766 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
USP3-207ENST00000558218 NEDD4P46934 1319 aa11.85□□□□□ -0.51
USP3-207ENST00000558218 TRIOBPQ9H2D6 2365 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 B4E1Z4 1266 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 ADAMTS4O75173 837 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 CST5P28325 142 aaPredicted RBP11.84□□□□□ -0.51
USP3-207ENST00000558218 SLC16A2P36021 539 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 ADCYAP1R1P41586 468 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 TRDNQ13061 729 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 ASPRV1Q53RT3 343 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 ANO1Q5XXA6 986 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 CCDC174Q6PII3 467 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 PCSK9Q8NBP7 692 aaKnown RBP11.84□□□□□ -0.51
USP3-207ENST00000558218 PNMA1Q8ND90 353 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 KLHDC9Q8NEP7 349 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 MORC4Q8TE76 937 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 UBAC1Q9BSL1 405 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 PRKAG2Q9UGJ0 569 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 ZMYND8Q9ULU4 1186 aaPredicted RBP11.84□□□□□ -0.51
USP3-207ENST00000558218 Q9Y3F1 56 aa11.84□□□□□ -0.51
USP3-207ENST00000558218 LAMA4Q16363 1823 aa11.83□□□□□ -0.51
USP3-207ENST00000558218 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 B4DLN1 442 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 SGSM2O43147 1006 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 MRPL12P52815 198 aaKnown RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 GJA9P57773 515 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 RTP1P59025 263 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 CCDC144BQ3MJ40 725 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 ENAHQ8N8S7 591 aaPredicted RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 TOX2Q96NM4 488 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 LBHD1Q9BQE6 289 aaPredicted RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 ZKSCAN3Q9BRR0 538 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 SEZ6LQ9BYH1 1024 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 KATNBL1Q9H079 304 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 UPF3AQ9H1J1 476 aaKnown RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
USP3-207ENST00000558218 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 ELP1O95163 1332 aa11.83□□□□□ -0.52
USP3-207ENST00000558218 PGK1P00558 417 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 SYN1P17600 705 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 MAGEA10P43363 369 aaPredicted RBP11.82□□□□□ -0.52
USP3-207ENST00000558218 ACLYP53396 1101 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 TRAF1Q13077 416 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 CCSAPQ6IQ19 270 aaPredicted RBP11.82□□□□□ -0.52
USP3-207ENST00000558218 DNERQ8NFT8 737 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 VTA1Q9NP79 307 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 TNKSO95271 1327 aa11.82□□□□□ -0.52
USP3-207ENST00000558218 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
USP3-207ENST00000558218 CYP21A2P08686 494 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 SNAP25P60880 206 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 TNFAIP2Q03169 654 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 BAATQ14032 418 aaPredicted RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 SEC23AQ15436 765 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 IFIT1BQ5T764 474 aaKnown RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 NSMFQ6X4W1 530 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 CENPQQ7L2Z9 268 aaPredicted RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 CLEC4DQ8WXI8 215 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 GLT1D1Q96MS3 346 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 IL25Q9H293 177 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
USP3-207ENST00000558218 SYNRGQ9UMZ2 1314 aa11.81□□□□□ -0.52
USP3-207ENST00000558218 MCM3APO60318 1980 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
USP3-207ENST00000558218 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 ERICH2A1L162 156 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 CABYRO75952 493 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 PBX2P40425 430 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 PTH1RQ03431 593 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms