RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ASTN1O14525 1302 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 GRIN2DO15399 1336 aa6.2□□□□□ -1.42
SPG11-208ENST00000558155 SPTBN5Q9NRC6 3674 aaKnown RBP6.19□□□□□ -1.42
SPG11-208ENST00000558155 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
SPG11-208ENST00000558155 C2orf72A6NCS6 295 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 FAM86C2PA6NEL3 165 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 IQCF3P0C7M6 154 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 SMPD1P17405 629 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 ADD2P35612 726 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 MRE11P49959 708 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 PSMC6P62333 389 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 GRB10Q13322 594 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
SPG11-208ENST00000558155 KRT40Q6A162 431 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 ZSCAN25Q6NSZ9 544 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 CTR9Q6PD62 1173 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 KIAA1211Q6ZU35 1233 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 HERC6Q8IVU3 1022 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 RPAP2Q8IXW5 612 aaPredicted RBP6.19□□□□□ -1.42
SPG11-208ENST00000558155 GJD3Q8N144 294 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 FAM133AQ8N9E0 248 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 RHPN1Q8TCX5 695 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 CHURC1Q8WUH1 139 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 MKL1Q969V6 931 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 FGD4Q96M96 766 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 ZBED2Q9BTP6 218 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.19□□□□□ -1.42
SPG11-208ENST00000558155 KCNH6Q9H252 994 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 ACAD9Q9H845 621 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 C11orf16Q9NQ32 467 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 HOMER2Q9NSB8 354 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 ARPP21Q9UBL0 812 aaPredicted RBP6.19□□□□□ -1.42
SPG11-208ENST00000558155 LHX6Q9UPM6 363 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 EXOC6BQ9Y2D4 811 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 TNKSO95271 1327 aa6.19□□□□□ -1.42
SPG11-208ENST00000558155 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 SOWAHBA6NEL2 793 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 EPOPA6NHQ4 379 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 MINDY4BA8MYZ0 360 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 KPNA6O60684 536 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 BAIAP3O94812 1187 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 MYL3P08590 195 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 CYP2C9P11712 490 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 BMP3P12645 472 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 SSTR3P32745 418 aaPredicted RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 KCNJ6P48051 423 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 CPT1AP50416 773 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 PTPN11Q06124 597 aaPredicted RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 BFSP2Q13515 415 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 UBE3CQ15386 1083 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 PUS10Q3MIT2 529 aaKnown RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 LEXMQ3ZCV2 418 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 DUSP28Q4G0W2 176 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 SBK1Q52WX2 424 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 FAM47CQ5HY64 1035 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 SLFN13Q68D06 897 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 TAPT1Q6NXT6 567 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 FAM160B2Q86V87 743 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 STAG1Q8WVM7 1258 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 VWCEQ96DN2 955 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 KIF1BPQ96EK5 621 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 TRERF1Q96PN7 1200 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 MTG1Q9BT17 334 aaPredicted RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 BOLA2Q9H3K6 86 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 IL1RAPL2Q9NP60 686 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 VTA1Q9NP79 307 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 CD320Q9NPF0 282 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 PDGFCQ9NRA1 345 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 TRMT13Q9NUP7 481 aaKnown RBP6.18□□□□□ -1.42
SPG11-208ENST00000558155 PAG1Q9NWQ8 432 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 PLA2G2EQ9NZK7 142 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 SYNPO2Q9UMS6 1093 aa6.18□□□□□ -1.42
SPG11-208ENST00000558155 LRRC37A2A6NM11 1700 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 TRIP12Q14669 1992 aaPredicted RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 TMEM232C9JQI7 657 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 LPXNO60711 386 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 RAB11FIP3O75154 756 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 PARNO95453 639 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 TTLL1O95922 423 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ALAS1P13196 640 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ATP5JP18859 108 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 RASA1P20936 1047 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 STAT2P52630 851 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 PURAQ00577 322 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 IKQ13123 557 aaPredicted RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 LRRFIP1Q32MZ4 808 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 NBPF20Q3BBV1 942 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 PPP4R3BQ5MIZ7 849 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 CEP85Q6P2H3 762 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 NFRKBQ6P4R8 1299 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 STK11IPQ8N1F8 1099 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 GMCL1P1Q8NEA9 526 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 CRBNQ96SW2 442 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 MFRPQ9BY79 579 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms