RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MYOCOSA0A1B0GUC4 107 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 HRKO00198 91 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
SPG11-206ENST00000558093 CPP00450 1065 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 C1QTNF9P0C862 333 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 GLDCP23378 1020 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 HOXC12P31275 282 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 VIPR1P32241 457 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 NR1I3Q14994 352 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 RPTNQ6XPR3 784 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 NPM2Q86SE8 214 aaKnown RBP5.26□□□□□ -1.57
SPG11-206ENST00000558093 ANKLE2Q86XL3 938 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 COPS5Q92905 334 aa5.26□□□□□ -1.57
SPG11-206ENST00000558093 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 MYO1BO43795 1136 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 CYBBP04839 570 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 DBHP09172 617 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 DLG4P78352 724 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 KCNAB2Q13303 367 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 PRSS53Q2L4Q9 553 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 PLEKHN1Q494U1 663 aaPredicted RBP5.25□□□□□ -1.57
SPG11-206ENST00000558093 NBPF6Q5VWK0 638 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 ZC3H14Q6PJT7 736 aaKnown RBP5.25□□□□□ -1.57
SPG11-206ENST00000558093 PAQR3Q6TCH7 311 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 PPIL6Q8IXY8 311 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 NBPF4Q96M43 638 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 CCDC140Q96MF4 163 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 SGPP1Q9BX95 441 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 MARCH2Q9P0N8 246 aa5.25□□□□□ -1.57
SPG11-206ENST00000558093 C7orf72A4D263 438 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 NPIPB6E9PJ23 425 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 F8W031 263 aaPredicted RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 SRGAP3O43295 1099 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 MED14OSP0DP75 135 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 YBX1P67809 324 aaKnown RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 HSP90AA2PQ14568 343 aaPredicted RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 E4F1Q66K89 784 aaPredicted RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 IQCEQ6IPM2 695 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 LRRC47Q8N1G4 583 aaKnown RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 ST13P5Q8NFI4 369 aaPredicted RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 NLGN2Q8NFZ4 835 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 NPLOC4Q8TAT6 608 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 FRS2Q8WU20 508 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 KCTD13Q8WZ19 329 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 DIO2Q92813 273 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 ARMC5Q96C12 935 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 MMP19Q99542 508 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 AARSD1Q9BTE6 412 aaKnown RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 IER2Q9BTL4 223 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 KLHL14Q9P2G3 628 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 MBD1Q9UIS9 605 aaPredicted RBP5.24□□□□□ -1.57
SPG11-206ENST00000558093 NUDT5Q9UKK9 219 aa5.24□□□□□ -1.57
SPG11-206ENST00000558093 A0A1W2PQU0 124 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 ZC3H12DA2A288 527 aaKnown RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 RFXAPO00287 272 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 PDPK1O15530 556 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 FUCA1P04066 466 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 MAPKAPK2P49137 400 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 GFRA1P56159 465 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 RPL11P62913 178 aaKnown RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 ZNF200P98182 395 aaPredicted RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 SF1Q15637 639 aaKnown RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 KCNA10Q16322 511 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 MBLAC2Q68D91 279 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 WWC2Q6AWC2 1192 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 TMEM145Q8NBT3 493 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 ZSCAN18Q8TBC5 510 aaPredicted RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 PMFBP1Q8TBY8 1022 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 SGSM3Q96HU1 749 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 CHAMP1Q96JM3 812 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.571e-7■□□□□ 10
SPG11-206ENST00000558093 SIRPGQ9P1W8 387 aa5.23□□□□□ -1.57
SPG11-206ENST00000558093 CNOT6Q9ULM6 557 aaKnown RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 SMG5Q9UPR3 1016 aaKnown RBP5.23□□□□□ -1.57
SPG11-206ENST00000558093 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 SCG5P05408 212 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 LTBRP36941 435 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 GRIA2P42262 883 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 GTF2A2P52657 109 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 LINC00310P59036 64 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 IFRD2Q12894 506 aaPredicted RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 CBX2Q14781 532 aaPredicted RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 INF2Q27J81 1249 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 ACBD5Q5T8D3 534 aaPredicted RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 CIAPIN1Q6FI81 312 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 USP53Q70EK8 1073 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 DCP2Q8IU60 420 aaKnown RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 TEX2Q8IWB9 1127 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 NETO2Q8NC67 525 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 SREK1Q8WXA9 508 aaKnown RBP5.22□□□□□ -1.57
SPG11-206ENST00000558093 PEX11GQ96HA9 241 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 SIGLEC10Q96LC7 697 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 CNTD2Q9H8S5 307 aa5.22□□□□□ -1.57
SPG11-206ENST00000558093 RXFP1Q9HBX9 757 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms