RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 SERPINB4P48594 390 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 ITIH3Q06033 890 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 FAM209AQ5JX71 171 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 NEK10Q6ZWH5 1172 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 HIC2Q96JB3 615 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 SLC12A6Q9UHW9 1150 aa12.13□□□□□ -0.47
SEMA4B-204ENST00000558065 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 INAQ16352 499 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 LRRC49Q8IUZ0 686 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ZMAT2Q96NC0 199 aaKnown RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 SPATA16Q9BXB7 569 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 SPTLC1O15269 473 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 KDM1AO60341 852 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 KRT9P35527 623 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 CSE1LP55060 971 aaKnown RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 RESTQ13127 1097 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 CYP26C1Q6V0L0 522 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ABTB1Q969K4 478 aaPredicted RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 NKX1-2Q9UD57 310 aaPredicted RBP12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ZNF148Q9UQR1 794 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 CARD8Q9Y2G2 431 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ATP10BO94823 1461 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 HSF2BPO75031 334 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 SERPINC1P01008 464 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 GPR162Q16538 588 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 IRGCQ6NXR0 463 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 C3orf62Q6ZUJ4 267 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 CGREF1Q99674 301 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 SIKE1Q9BRV8 207 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
SEMA4B-204ENST00000558065 BACH1O14867 736 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 BIRC5O15392 142 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 IL4RP24394 825 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 GUCY2DQ02846 1103 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 MYH8P13535 1937 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 MAGEB3O15480 346 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 MARCH6O60337 910 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 DQX1Q8TE96 717 aaKnown RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
SEMA4B-204ENST00000558065 PDCP20941 246 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 ARHGEF6Q15052 776 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 TPK1Q9H3S4 243 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 COMMD3-BMI1R4GMX3 469 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 KRT16P08779 473 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 NLRP12P59046 1061 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 MAP7Q14244 749 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 GRAMD4Q6IC98 578 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 PDILTQ8N807 584 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 STKLD1Q8NE28 680 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 AASDHPPTQ9NRN7 309 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 FAM32AQ9Y421 112 aaKnown RBP12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 ADGRL2O95490 1459 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 MAGEA13PA6NCF6 341 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 PEX5P50542 639 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 NCALDP61601 193 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 CABP7Q86V35 215 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 CAVIN3Q969G5 261 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
SEMA4B-204ENST00000558065 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 DRD4P21917 467 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 ESX1Q8N693 406 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 SIL1Q9H173 461 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 NPATQ14207 1427 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 TBC1D12O60347 775 aa12.09□□□□□ -0.47
SEMA4B-204ENST00000558065 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms