RNA–Protein interactions for RNA: ENST00000557998.5

RNF111-202, Transcript of ring finger protein 111, humanhuman

TSL 2 BASIC

Gene RNF111, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-202ENST00000557998 P2RX5Q93086 422 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 COL22A1Q8NFW1 1626 aaPredicted RBP12.05□□□□□ -0.48
RNF111-202ENST00000557998 CTAGE15A4D2H0 777 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 CTAGE8P0CG41 777 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 PRPHP41219 470 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 CTAGE6Q86UF2 777 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 CTAGE4Q8IX94 777 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 PANK4Q9NVE7 773 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 TMEM260Q9NX78 707 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 GAS7O60861 476 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 TACC1O75410 805 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 KRT13P13646 458 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 MATR3P43243 847 aaKnown RBP eCLIP12.05□□□□□ -0.48
RNF111-202ENST00000557998 PDE4CQ08493 712 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 GOLGA8FQ08AF8 430 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 GOLGA8DPQ0D2H9 430 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 CLEC10AQ8IUN9 316 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 EEF2KMTQ96G04 330 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 PPP1R13BQ96KQ4 1090 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 ZBTB21Q9ULJ3 1066 aa12.05□□□□□ -0.48
RNF111-202ENST00000557998 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 PLS1Q14651 629 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 IQCDQ96DY2 449 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 SPTLC3Q9NUV7 552 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF111-202ENST00000557998 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 PP2D1A8MPX8 630 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 F5H6K3 240 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 ZBED4O75132 1171 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 CASP14P31944 242 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 CBX1P83916 185 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 ARID5AQ03989 594 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 KLRC3Q07444 240 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 MCM6Q14566 821 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 WDR78Q5VTH9 848 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 TUBGCP2Q9BSJ2 902 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 ARHGEF35A5YM69 484 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 ERCC3P19447 782 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 MCM3P25205 808 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 RCSD1Q6JBY9 416 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 KCNF1Q9H3M0 494 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 MYH3P11055 1940 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 CALUO43852 315 aaPredicted RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 EPB41P11171 864 aaKnown RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 CCNE1P24864 410 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 DCAF17Q5H9S7 520 aaPredicted RBP12.04□□□□□ -0.48
RNF111-202ENST00000557998 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 GOLGA1Q92805 767 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
RNF111-202ENST00000557998 DNA2P51530 1060 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 MRPL44Q9H9J2 332 aaKnown RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 TACC3Q9Y6A5 838 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 RBL2Q08999 1139 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 CIAPIN1Q6FI81 312 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 GNA14O95837 355 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
RNF111-202ENST00000557998 MAP9Q49MG5 647 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 DCAF15Q66K64 600 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 TTBK2Q6IQ55 1244 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 TSC1Q92574 1164 aa12.03□□□□□ -0.48
RNF111-202ENST00000557998 POTEMA6NI47 508 aa12.02□□□□□ -0.48
RNF111-202ENST00000557998 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.48
RNF111-202ENST00000557998 TUBB4BP68371 445 aa12.02□□□□□ -0.48
RNF111-202ENST00000557998 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.48
RNF111-202ENST00000557998 CYP4A11Q02928 519 aa12.02□□□□□ -0.48
RNF111-202ENST00000557998 KRT31Q15323 416 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms