RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 POLD1P28340 1107 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 PRCPP42785 496 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 RAD23BP54727 409 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 CTDSPL2Q05D32 466 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 CUL3Q13618 768 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 DBN1Q16643 649 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 HHATQ5VTY9 493 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 ARL10Q8N8L6 244 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 RAB27AP51159 221 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 ANTXR2P58335 489 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 ITGB3BPQ13352 177 aaPredicted RBP12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 GCKRQ14397 625 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 TSNAXIP1Q2TAA8 658 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 TMEM154Q6P9G4 183 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 STXBP3O00186 592 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 ATP4AP20648 1035 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 HSD17B3P37058 310 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 CDKAL1Q5VV42 579 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 RETREG2Q8NC44 543 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 EZH1Q92800 747 aaPredicted RBP12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
RPGRIP1-213ENST00000557771 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 RGS16O15492 202 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 RAD51CO43502 376 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 RPN1P04843 607 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ALDH5A1P51649 535 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ICA1Q05084 483 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 WTAPQ15007 396 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 GBP5Q96PP8 586 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 VCXQ9H320 206 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 DLG5Q8TDM6 1919 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 UBOX5O94941 541 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 UBA7P41226 1012 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 OTUD6AQ7L8S5 288 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 PUS7LQ9H0K6 701 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 HOMER3Q9NSC5 361 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 AATFQ9NY61 560 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 LIMA1Q9UHB6 759 aaKnown RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 H7C1D1 291 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 PFDN1O60925 122 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ASIC1P78348 528 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ZBED6P86452 979 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 PTGDRQ13258 359 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 TRPM8Q7Z2W7 1104 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 TATDN2Q93075 761 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 ZNF570Q96NI8 536 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
RPGRIP1-213ENST00000557771 MYH8P13535 1937 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 ITIH6Q6UXX5 1313 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 PALMO75781 387 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 MMP1P03956 469 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 CHN1P15882 459 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 FERP16591 822 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 SLMAPQ14BN4 828 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 TLDC1Q6P9B6 456 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 LRRC34Q8IZ02 419 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 IQCKQ8N0W5 287 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 CDK5RAP3Q96JB5 506 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 FLT4P35916 1363 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 A0A087X0B3 334 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 ZAP70P43403 619 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 INHBEP58166 350 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 NLRP5P59047 1200 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 XRCC4Q13426 336 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
RPGRIP1-213ENST00000557771 ERFP50548 548 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms