RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
LINC00639-205ENST00000557440 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
LINC00639-205ENST00000557440 GLIS3Q8NEA6 775 aa15.32■□□□□ 0.04
LINC00639-205ENST00000557440 SPAG5Q96R06 1193 aa15.32■□□□□ 0.04
LINC00639-205ENST00000557440 PANX2Q96RD6 677 aa15.32■□□□□ 0.04
LINC00639-205ENST00000557440 IFIH1Q9BYX4 1025 aaKnown RBP15.32■□□□□ 0.04
LINC00639-205ENST00000557440 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
LINC00639-205ENST00000557440 APBA1Q02410 837 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 E9PMD0 336 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 SEMA3EO15041 775 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 N4BP1O75113 896 aaKnown RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 C2orf54Q08AI8 447 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 TMEM139Q8IV31 216 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 FAM107BQ9H098 131 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 EHD2Q9NZN4 543 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 BICDL2A1A5D9 508 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 STXBP3O00186 592 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 USP8P40818 1118 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 MAGEA1P43355 309 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 RASSF7Q02833 373 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 PDXDC2PQ6P474 469 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
LINC00639-205ENST00000557440 LEMD3Q9Y2U8 911 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
LINC00639-205ENST00000557440 MOCS3O95396 460 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 VSNL1P62760 191 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 KRT83P78385 493 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 NPY5RQ15761 445 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 CNNM4Q6P4Q7 775 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 RIN2Q8WYP3 895 aaPredicted RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 NHEJ1Q9H9Q4 299 aaPredicted RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 DDX25Q9UHL0 483 aaKnown RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 PCDHAC2Q9Y5I4 1007 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 NCK2O43639 380 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 GRM4Q14833 912 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 LLGL1Q15334 1064 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 FAM114A1Q8IWE2 563 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 NUDT12Q9BQG2 462 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 SERPINB13Q9UIV8 391 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 FLT1P17948 1338 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 CFBP00751 764 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 PLCG2P16885 1265 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 DNM2P50570 870 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 POLR2FP61218 127 aaKnown RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 HLTFQ14527 1009 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 PNKPQ96T60 521 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 RSPH14Q9UHP6 348 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
LINC00639-205ENST00000557440 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
LINC00639-205ENST00000557440 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SLC37A4O43826 429 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SASH3O75995 380 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 TUBB4AP04350 444 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 DDX12PQ92771 950 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 KCNQ5Q9NR82 932 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 CLRN2A0PK11 232 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 GABPB1Q06547 395 aaPredicted RBP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 NFIAQ12857 509 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 MRPL12P52815 198 aaKnown RBP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SH2D3AQ9BRG2 576 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 NAA15Q9BXJ9 866 aaKnown RBP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 TCEAL9Q9UHQ7 104 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 PACSIN2Q9UNF0 486 aaPredicted RBP15.29■□□□□ 0.04
LINC00639-205ENST00000557440 SAMM50Q9Y512 469 aa15.29■□□□□ 0.04
LINC00639-205ENST00000557440 TUBGCP6Q96RT7 1819 aa15.28■□□□□ 0.04
LINC00639-205ENST00000557440 TACC1O75410 805 aa15.28■□□□□ 0.04
LINC00639-205ENST00000557440 PCP11498 1178 aaKnown RBP15.28■□□□□ 0.04
LINC00639-205ENST00000557440 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
LINC00639-205ENST00000557440 PAFAH1B1P43034 410 aa15.28■□□□□ 0.04
LINC00639-205ENST00000557440 TBX2Q13207 712 aaPredicted RBP15.28■□□□□ 0.04
LINC00639-205ENST00000557440 POTEB3A0JP26 581 aa15.28■□□□□ 0.04
LINC00639-205ENST00000557440 POTECB2RU33 542 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms