RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 BCAR3O75815 825 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 SMNDC1O75940 238 aaKnown RBP eCLIP7.44□□□□□ -1.22
FOXN3-215ENST00000557261 SCGB1D2O95969 90 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 IL2RBP14784 551 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 PLCG1P19174 1290 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 GNALP38405 381 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 MCL1Q07820 350 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 DCTN1Q14203 1278 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 LBRQ14739 615 aaKnown RBP7.44□□□□□ -1.22
FOXN3-215ENST00000557261 NCAPHQ15003 741 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 RNFT1Q5M7Z0 435 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 TOM1L2Q6ZVM7 507 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 NLRC3Q7RTR2 1065 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 PPFIBP1Q86W92 1011 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 VWA5B2Q8N398 1253 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 SMAD5Q99717 465 aaKnown RBP7.44□□□□□ -1.22
FOXN3-215ENST00000557261 SMG9Q9H0W8 520 aaKnown RBP7.44□□□□□ -1.22
FOXN3-215ENST00000557261 CCDC86Q9H6F5 360 aaKnown RBP7.44□□□□□ -1.22
FOXN3-215ENST00000557261 CHST12Q9NRB3 414 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 LRRC4BQ9NT99 713 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 ABCC4O15439 1325 aa7.44□□□□□ -1.22
FOXN3-215ENST00000557261 RFPL3O75679 317 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 EYA4O95677 639 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 TRIM27P14373 513 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 SOX5P35711 763 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 GRIA2P42262 883 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 RAB27AP51159 221 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 TEFQ10587 303 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 PPP2R5AQ15172 486 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
FOXN3-215ENST00000557261 GNPTABQ3T906 1256 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 TXNDC11Q6PKC3 985 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 FAM35AQ86V20 835 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-215ENST00000557261 C8orf58Q8NAV2 365 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
FOXN3-215ENST00000557261 WDR89Q96FK6 387 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-215ENST00000557261 RPS6KC1Q96S38 1066 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 DHRS4Q9BTZ2 278 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 API5Q9BZZ5 524 aaKnown RBP7.43□□□□□ -1.22
FOXN3-215ENST00000557261 ADAM19Q9H013 955 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 SUSD2Q9UGT4 822 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 MCM8Q9UJA3 840 aa7.43□□□□□ -1.22
FOXN3-215ENST00000557261 KCPQ6ZWJ8 1503 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 ERVV-2B6SEH9 535 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 CYP27B1O15528 508 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 PTPRAP18433 802 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 SLC7A5Q01650 507 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 GSTM4Q03013 218 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 IKBKEQ14164 716 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 MVPQ14764 893 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 PCBP1Q15365 356 aaKnown RBP eCLIP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 TDRD10Q5VZ19 366 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 SYT9Q86SS6 491 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 SMC5Q8IY18 1101 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 FTSJ3Q8IY81 847 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 LRRC47Q8N1G4 583 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 LEO1Q8WVC0 666 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 KIF2CQ99661 725 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 TRIM8Q9BZR9 551 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 SLC52A2Q9HAB3 445 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
FOXN3-215ENST00000557261 LAS1LQ9Y4W2 734 aaKnown RBP7.42□□□□□ -1.22
FOXN3-215ENST00000557261 RREB1Q92766 1687 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 RBAK-RBAKDNI3L0D1 243 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 GPR25O00155 361 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 C2CD2LO14523 706 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TNFRSF10CO14798 259 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 PLD2O14939 933 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TBX1O43435 398 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 PLIN1O60240 522 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF862O60290 1169 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TP53P04637 393 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 FGFR3P22607 806 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 PCBP4P57723 403 aaKnown RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 EIF4A1P60842 406 aaKnown RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 STRN3Q13033 797 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 BIRC2Q13490 618 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 MTMR1Q13613 665 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 LONRF2Q1L5Z9 754 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SV2CQ496J9 727 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 C20orf194Q5TEA3 1177 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 CCDC30Q5VVM6 783 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SV2AQ7L0J3 742 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TSPYL6Q8N831 410 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 EXOC6Q8TAG9 804 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SLC7A3Q8WY07 619 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF837Q96EG3 531 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SLC39A13Q96H72 371 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms