RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.98□□□□□ -0.17
APEX1-216ENST00000557159 TNFRSF25Q93038 417 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 SECISBP2LQ93073 1101 aaKnown RBP13.98□□□□□ -0.17
APEX1-216ENST00000557159 MYL10Q9BUA6 226 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 EPN3Q9H201 632 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 GNL3LQ9NVN8 582 aaKnown RBP13.98□□□□□ -0.17
APEX1-216ENST00000557159 STIM2Q9P246 746 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 ZNF532Q9HCE3 1301 aa13.98□□□□□ -0.17
APEX1-216ENST00000557159 ERICH2A1L162 156 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 PRPF3O43395 683 aaKnown RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 LCA5LO95447 670 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 APPP05067 770 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 ARL6IP4Q66PJ3 421 aaKnown RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 TAX1BP1Q86VP1 789 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 GPATCH11Q8N954 259 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 SPATA4Q8NEY3 305 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 RUFY1Q96T51 708 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 SPON1Q9HCB6 807 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 TACC1O75410 805 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 POLD1P28340 1107 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 CTDSPL2Q05D32 466 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 NEDD9Q14511 834 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 TTMPQ5BVD1 217 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 PRR5LQ6MZQ0 368 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 EIF1ADQ8N9N8 165 aaKnown RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 AIDAQ96BJ3 306 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 NAPBQ9H115 298 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 VCPKMTQ9H867 229 aa13.97□□□□□ -0.17
APEX1-216ENST00000557159 NHEJ1Q9H9Q4 299 aaPredicted RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 EPB41L4AQ9HCS5 686 aaPredicted RBP13.97□□□□□ -0.17
APEX1-216ENST00000557159 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 IDH1O75874 414 aaKnown RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 RPN1P04843 607 aaKnown RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 PPP1R2P41236 205 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 PHKA1P46020 1223 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 PREPLQ4J6C6 727 aaPredicted RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 WLSQ5T9L3 541 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 CCDC50Q8IVM0 306 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.17
APEX1-216ENST00000557159 ACTR5Q9H9F9 607 aaPredicted RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
APEX1-216ENST00000557159 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 HYOU1Q9Y4L1 999 aa13.96□□□□□ -0.17
APEX1-216ENST00000557159 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 RASSF9O75901 435 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 PRCPP42785 496 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 ACTN3Q08043 901 aaPredicted RBP13.95□□□□□ -0.18
APEX1-216ENST00000557159 C2orf54Q08AI8 447 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 FUT2Q10981 343 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 PKN1Q16512 942 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 TTC38Q5R3I4 469 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 TMED8Q6PL24 325 aaPredicted RBP13.95□□□□□ -0.18
APEX1-216ENST00000557159 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 MTRQ99707 1265 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 JADE2Q9NQC1 790 aa13.95□□□□□ -0.18
APEX1-216ENST00000557159 RBM28Q9NW13 759 aaKnown RBP13.95□□□□□ -0.18
APEX1-216ENST00000557159 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
APEX1-216ENST00000557159 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
APEX1-216ENST00000557159 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PJA2O43164 708 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 ZMYND10O75800 440 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 CASP1P29466 404 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 LSP1P33241 339 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 LONP1P36776 959 aaKnown RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 NAA35Q5VZE5 725 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PPP4R3AQ6IN85 833 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 C6orf89Q6UWU4 347 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 ZSCAN29Q8IWY8 852 aaPredicted RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 GSPT2Q8IYD1 628 aaKnown RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 DHTKD1Q96HY7 919 aaPredicted RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 EHD4Q9H223 541 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 GDF3Q9NR23 364 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 EXOC1Q9NV70 894 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 HMGB1P1B2RPK0 211 aaPredicted RBP13.94□□□□□ -0.18
APEX1-216ENST00000557159 H0YHG0 523 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 ZNF185O15231 689 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PPP1R37O75864 691 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 SEC23AQ15436 765 aa13.94□□□□□ -0.18
APEX1-216ENST00000557159 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms