RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 RASIP1Q5U651 963 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 NOC4LQ9BVI4 516 aaKnown RBP17.43■□□□□ 0.38
CHD8-211ENST00000556833 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 TRMT13Q9NUP7 481 aaKnown RBP17.43■□□□□ 0.38
CHD8-211ENST00000556833 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
CHD8-211ENST00000556833 YBX2Q9Y2T7 364 aaKnown RBP17.43■□□□□ 0.38
CHD8-211ENST00000556833 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 ORC4O43929 436 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 FGAP02671 866 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 FGBP02675 491 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 CYP2C9P11712 490 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 MYOGP15173 224 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 PDE1AP54750 535 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 IQSEC1Q6DN90 963 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 SLC43A3Q8NBI5 491 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 WDR11Q9BZH6 1224 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 VTA1Q9NP79 307 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 MSRAQ9UJ68 235 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 CHD7Q9P2D1 2997 aa17.42■□□□□ 0.38
CHD8-211ENST00000556833 MYH6P13533 1939 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 CABYRO75952 493 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 TOP1P11387 765 aaKnown RBP17.41■□□□□ 0.38
CHD8-211ENST00000556833 NKX3-2P78367 333 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 ADGRE1Q14246 886 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 USH1GQ495M9 461 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 FAM47CQ5HY64 1035 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 DEFB128Q7Z7B8 93 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 HERVK_113Q902F9 699 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 COPS5Q92905 334 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 RILPL2Q969X0 211 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
CHD8-211ENST00000556833 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
CHD8-211ENST00000556833 PDHBP11177 359 aa17.4■□□□□ 0.38
CHD8-211ENST00000556833 MCMDC2Q4G0Z9 681 aa17.4■□□□□ 0.38
CHD8-211ENST00000556833 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
CHD8-211ENST00000556833 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
CHD8-211ENST00000556833 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
CHD8-211ENST00000556833 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
CHD8-211ENST00000556833 REV3LO60673 3130 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 ALX1Q15699 326 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 RAB30Q15771 203 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 DUSP28Q4G0W2 176 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
CHD8-211ENST00000556833 SLC28A3Q9HAS3 691 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 NEDD4P46934 1319 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 TANC1Q9C0D5 1861 aa17.39■□□□□ 0.37
CHD8-211ENST00000556833 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
CHD8-211ENST00000556833 TCF20Q9UGU0 1960 aaKnown RBP17.39■□□□□ 0.37
CHD8-211ENST00000556833 NOVP48745 357 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 PDE4DQ08499 809 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 TTLL4Q14679 1199 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 TJAP1Q5JTD0 557 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 MORC4Q8TE76 937 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 UBA5Q9GZZ9 404 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 SCN10AQ9Y5Y9 1956 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 TNKSO95271 1327 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
CHD8-211ENST00000556833 FGRP09769 529 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 RPS6P62753 249 aaKnown RBP17.37■□□□□ 0.37
CHD8-211ENST00000556833 PURAQ00577 322 aaKnown RBP17.37■□□□□ 0.37
CHD8-211ENST00000556833 ZNF543Q08ER8 600 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 PPP2R5BQ15173 497 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 NBPF20Q3BBV1 942 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 PPP2R2DQ66LE6 453 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 VWCEQ96DN2 955 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 CERS4Q9HA82 394 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 GPHNQ9NQX3 736 aaPredicted RBP17.37■□□□□ 0.37
CHD8-211ENST00000556833 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 Q9Y3F1 56 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
CHD8-211ENST00000556833 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
CHD8-211ENST00000556833 CPT1AP50416 773 aa17.36■□□□□ 0.37
CHD8-211ENST00000556833 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
CHD8-211ENST00000556833 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
CHD8-211ENST00000556833 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
CHD8-211ENST00000556833 RFXAPO00287 272 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 ARIH2O95376 493 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
CHD8-211ENST00000556833 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 TCP11L1Q9NUJ3 509 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 THEGQ9P2T0 379 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 PTPRSQ13332 1948 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 KIAA1217Q5T5P2 1943 aa17.35■□□□□ 0.37
CHD8-211ENST00000556833 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
CHD8-211ENST00000556833 TXNP10599 105 aaKnown RBP17.34■□□□□ 0.37
CHD8-211ENST00000556833 CHST3Q7LGC8 479 aa17.34■□□□□ 0.37
CHD8-211ENST00000556833 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
CHD8-211ENST00000556833 MUC3AQ02505 3323 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms