RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ABCB11O95342 1321 aa12.05□□□□□ -0.48
SHMT2-224ENST00000556737 LOC102724159A0A0B4J2E5 919 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 MOXD2PA6NHM9 499 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 CYTH3O43739 400 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 SMPD1P17405 629 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 CALML3P27482 149 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 ACLYP53396 1101 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 WTAPQ15007 396 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 PWP2Q15269 919 aaKnown RBP12.04□□□□□ -0.48
SHMT2-224ENST00000556737 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 EEPD1Q7L9B9 569 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 TLK2Q86UE8 772 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 RGS22Q8NE09 1264 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 ANO2Q9NQ90 1003 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 COL20A1Q9P218 1284 aa12.04□□□□□ -0.48
SHMT2-224ENST00000556737 ADD3Q9UEY8 706 aaKnown RBP12.04□□□□□ -0.48
SHMT2-224ENST00000556737 KIAA1217Q5T5P2 1943 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 RBM47A0AV96 593 aaKnown RBP12.03□□□□□ -0.48
SHMT2-224ENST00000556737 ERICH2A1L162 156 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-224ENST00000556737 PRC1O43663 620 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 CDC45O75419 566 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-224ENST00000556737 GHRHRQ02643 423 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 TNFAIP2Q03169 654 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
SHMT2-224ENST00000556737 KCNA10Q16322 511 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 DNERQ8NFT8 737 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-224ENST00000556737 TBC1D5Q92609 795 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 MAF1Q9H063 256 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
SHMT2-224ENST00000556737 SOX1O00570 391 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-224ENST00000556737 ZBTB5O15062 677 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
SHMT2-224ENST00000556737 DDAH1O94760 285 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 ASGR1P07306 291 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 BEX3Q00994 111 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 TLE2Q04725 743 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 SH3RF1Q7Z6J0 888 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 ZNF654Q8IZM8 581 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 MTA3Q9BTC8 594 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 VAT1LQ9HCJ6 419 aa12.02□□□□□ -0.49
SHMT2-224ENST00000556737 TRIM43BA6NCK2 446 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 ITGB8P26012 769 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 HSD17B4P51659 736 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-224ENST00000556737 DUSP28Q4G0W2 176 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 IQSEC1Q6DN90 963 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 ANKRD33Q7Z3H0 272 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 TRIM43Q96BQ3 446 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-224ENST00000556737 PIGSQ96S52 555 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 MAP3K14Q99558 947 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 SPC25Q9HBM1 224 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 STARD7Q9NQZ5 370 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
SHMT2-224ENST00000556737 Q9Y3F1 56 aa12.01□□□□□ -0.49
SHMT2-224ENST00000556737 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
SHMT2-224ENST00000556737 CLTBP09497 229 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 MCM5P33992 734 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 CDK7P50613 346 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 PDE4DQ08499 809 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
SHMT2-224ENST00000556737 GNASQ5JWF2 1037 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 CASC1Q6TDU7 716 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 HOMER1Q86YM7 354 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 TDHQ8IZJ6 230 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 PCSK9Q8NBP7 692 aaKnown RBP12□□□□□ -0.49
SHMT2-224ENST00000556737 NUP133Q8WUM0 1156 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 TMEM87BQ96K49 555 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
SHMT2-224ENST00000556737 BAZ2BQ9UIF8 2168 aaKnown RBP12□□□□□ -0.49
SHMT2-224ENST00000556737 ELP1O95163 1332 aa12□□□□□ -0.49
SHMT2-224ENST00000556737 SCN10AQ9Y5Y9 1956 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-224ENST00000556737 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 DYNC1LI2O43237 492 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-224ENST00000556737 ARIH2O95376 493 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 LIFRP42702 1097 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 ADCK5Q3MIX3 580 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
SHMT2-224ENST00000556737 SGMS1Q86VZ5 419 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 SLC43A3Q8NBI5 491 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 GLT1D1Q96MS3 346 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 LRRC2Q9BYS8 371 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 WDR11Q9BZH6 1224 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 UBE2OQ9C0C9 1292 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms