RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 AFF2P51816 1311 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 SPATA31A3Q5VYP0 1347 aa6.43□□□□□ -1.38
ATXN3-243ENST00000556671 ANKARQ7Z5J8 1434 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 RGS13O14921 159 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 TLR3O15455 904 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 TRHRP34981 398 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 EIF4A3P38919 411 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 EVA1CP58658 441 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 CWF19L2Q2TBE0 894 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 ZNF772Q68DY9 489 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 LILRA2Q8N149 483 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 DHX38Q92620 1227 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 TOX2Q96NM4 488 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 EPB41L4BQ9H329 900 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 SUPT16HQ9Y5B9 1047 aaKnown RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 TOPAZ1Q8N9V7 1692 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 PNPLA6Q8IY17 1366 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 USP47Q96K76 1375 aa6.42□□□□□ -1.38
ATXN3-243ENST00000556671 TRPM3Q9HCF6 1732 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-243ENST00000556671 PXDNQ92626 1479 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 MAP2P11137 1827 aaKnown RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 SLC22A31A6NKX4 558 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 ATE1O95260 518 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 CFPP27918 469 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 GBP1P32455 592 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 MRPL58Q14197 206 aaKnown RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 NR0B2Q15466 257 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 C1QL4Q86Z23 238 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 OXR1Q8N573 874 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 RNF32Q9H0A6 362 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 BRMS1Q9HCU9 246 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 DCP1AQ9NPI6 582 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 PCDHB14Q9Y5E9 798 aa6.41□□□□□ -1.38
ATXN3-243ENST00000556671 KTN1Q86UP2 1357 aaKnown RBP6.41□□□□□ -1.38
ATXN3-243ENST00000556671 LRP6O75581 1613 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 ALS2Q96Q42 1657 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 FITM1A5D6W6 292 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 NFIBO00712 420 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 UBOX5O94941 541 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 TEKQ02763 1124 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 CHRNA2Q15822 529 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 ARSHQ5FYA8 562 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
ATXN3-243ENST00000556671 BCL2L13Q9BXK5 485 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 KCNK12Q9HB15 430 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 GMIPQ9P107 970 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 RGS17Q9UGC6 210 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-243ENST00000556671 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.38
ATXN3-243ENST00000556671 ARHGEF10O15013 1369 aa6.4□□□□□ -1.39
ATXN3-243ENST00000556671 ATP7BP35670 1465 aa6.4□□□□□ -1.39
ATXN3-243ENST00000556671 COL22A1Q8NFW1 1626 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-243ENST00000556671 ABCA3Q99758 1704 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 LTN1O94822 1766 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 CRKP46108 304 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 CLEC16AQ2KHT3 1053 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 GIPC2Q8TF65 315 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-243ENST00000556671 SYTL4Q96C24 671 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-243ENST00000556671 EHMT1Q9H9B1 1298 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 EBF1Q9UH73 591 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 SBNO1A3KN83 1393 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 TNS3Q68CZ2 1445 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 PLCH1Q4KWH8 1693 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 KIF20BQ96Q89 1820 aa6.39□□□□□ -1.39
ATXN3-243ENST00000556671 RAG1P15918 1043 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 CHMP4BP1P59074 171 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 RNF4P78317 190 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 CHRNEQ04844 493 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 DUSP4Q13115 394 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 NMIQ13287 307 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 OVOS1Q6IE37 1185 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 HS2ST1Q7LGA3 356 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 SPPL2CQ8IUH8 684 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 LRRC56Q8IYG6 542 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 ZSCAN18Q8TBC5 510 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 SYTL5Q8TDW5 730 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 TESK2Q96S53 571 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 HDAC8Q9BY41 377 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 ASCC2Q9H1I8 757 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 CWC22Q9HCG8 908 aaKnown RBP6.38□□□□□ -1.39
ATXN3-243ENST00000556671 BTG4Q9NY30 223 aa6.38□□□□□ -1.39
ATXN3-243ENST00000556671 USP35Q9P2H5 1018 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms