RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 GNEQ9Y223 722 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-205ENST00000556607 B4DLN1 442 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 CABYRO75952 493 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 TIMP1P01033 207 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 SNHG28P0DPA3 235 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 MRPL12P52815 198 aaKnown RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 RPS6P62753 249 aaKnown RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 ITGA7Q13683 1181 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 ENAHQ8N8S7 591 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 CLEC4DQ8WXI8 215 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 WDR11Q9BZH6 1224 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 GPHNQ9NQX3 736 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 MTMR10Q9NXD2 777 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 WDR19Q8NEZ3 1342 aa12.36□□□□□ -0.43
SPTLC2-205ENST00000556607 ERICH2A1L162 156 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 TMEM63BQ5T3F8 832 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 IL25Q9H293 177 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 Q9Y3F1 56 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 SZT2Q5T011 3432 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 ABCB11O95342 1321 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 RAD50Q92878 1312 aa12.35□□□□□ -0.43
SPTLC2-205ENST00000556607 CTAGE5O15320 804 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 MYL3P08590 195 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 CDK7P50613 346 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 EPHB4P54760 987 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 PSMC6P62333 389 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 DUSP28Q4G0W2 176 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 BRDTQ58F21 947 aaPredicted RBP12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 DNERQ8NFT8 737 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 MORC4Q8TE76 937 aa12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
SPTLC2-205ENST00000556607 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.43
SPTLC2-205ENST00000556607 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 CHMLP26374 656 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 CPT1AP50416 773 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 CHMP4BP1P59074 171 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 PTH1RQ03431 593 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 QRICH1Q2TAL8 776 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 TBX21Q9UL17 535 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 MRPL11Q9Y3B7 192 aaKnown RBP12.33□□□□□ -0.44
SPTLC2-205ENST00000556607 KLRF2D3W0D1 207 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 CFBP00751 764 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 CYP21A2P08686 494 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 ACRP10323 421 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 CSF2RAP15509 400 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 CYP2C18P33260 490 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 NKX3-2P78367 333 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 SMAD3P84022 425 aaKnown RBP12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 ARHGEF16Q5VV41 709 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 HOMER1Q86YM7 354 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 SCFD2Q8WU76 684 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 COPS5Q92905 334 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 TAAR1Q96RJ0 339 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.32□□□□□ -0.448e-7■■■■■ 32.7
SPTLC2-205ENST00000556607 HIPK3Q9H422 1215 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
SPTLC2-205ENST00000556607 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 NKRFO15226 690 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 B4GALT4O60513 344 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 CD4P01730 458 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 CCL23P55773 120 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 TTLL4Q14679 1199 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 WTAPQ15007 396 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 NSUN6Q8TEA1 469 aaKnown RBP12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 AMNQ9BXJ7 453 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 TRPV6Q9H1D0 765 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms