RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PRR12Q9ULL5 1215 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 TMX2Q9Y320 296 aa20.69■□□□□ 0.9
SDR39U1-220ENST00000556548 COBLO75128 1261 aa20.68■□□□□ 0.9
SDR39U1-220ENST00000556548 STX17P56962 302 aa20.68■□□□□ 0.9
SDR39U1-220ENST00000556548 MED15Q96RN5 788 aa20.68■□□□□ 0.9
SDR39U1-220ENST00000556548 PYM1Q9BRP8 204 aaKnown RBP20.68■□□□□ 0.9
SDR39U1-220ENST00000556548 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
SDR39U1-220ENST00000556548 TBC1D12O60347 775 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 PTPN21Q16825 1174 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 GSDMAQ96QA5 445 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 MTMR9Q96QG7 549 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 DACH1Q9UI36 760 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 GTPBP6O43824 516 aaPredicted RBP20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 SERPINC1P01008 464 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 PLCG1P19174 1290 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 STAT2P52630 851 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 ZNF280AP59817 542 aaPredicted RBP20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 DPF2Q92785 391 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
SDR39U1-220ENST00000556548 TPM3P06753 285 aa20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 KIFC2Q96AC6 838 aa20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 DDX25Q9UHL0 483 aaKnown RBP20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 MEIS2O14770 477 aa20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 DHX8Q14562 1220 aaKnown RBP20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 P2RX7Q99572 595 aaKnown RBP20.66■□□□□ 0.9
SDR39U1-220ENST00000556548 ZNF541Q9H0D2 1346 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 POTEMA6NI47 508 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 CCDC174Q6PII3 467 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 CACTINQ8WUQ7 758 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 AK8Q96MA6 479 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 FZD9O00144 591 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 MARCH6O60337 910 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 HOXA13P31271 388 aaPredicted RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 RBM10P98175 930 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 BTNL9Q6UXG8 535 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 TEPSINQ96N21 525 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 MMTAG2Q9BU76 263 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 SAMSN1Q9NSI8 373 aaKnown RBP20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 LRWD1Q9UFC0 647 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 MAPK8IP1Q9UQF2 711 aa20.65■□□□□ 0.9
SDR39U1-220ENST00000556548 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.9
SDR39U1-220ENST00000556548 RPN1P04843 607 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 UBASH3AP57075 661 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 TMC6Q7Z403 805 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 IGSF22Q8N9C0 903 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 PRDM4Q9UKN5 801 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 PPP1R3GB7ZBB8 358 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 PRAMEF18Q5VWM3 479 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 ENOX1Q8TC92 643 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 ZNF341Q9BYN7 854 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 VCPKMTQ9H867 229 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 FBXO28Q9NVF7 368 aa20.64■□□□□ 0.89
SDR39U1-220ENST00000556548 PHF20L1A8MW92 1017 aa20.63■□□□□ 0.89
SDR39U1-220ENST00000556548 CDK11BP21127 795 aaKnown RBP20.63■□□□□ 0.89
SDR39U1-220ENST00000556548 ORC2Q13416 577 aaPredicted RBP20.63■□□□□ 0.89
SDR39U1-220ENST00000556548 DGKZQ13574 1117 aa20.63■□□□□ 0.89
SDR39U1-220ENST00000556548 PPP4R3AQ6IN85 833 aa20.63■□□□□ 0.89
SDR39U1-220ENST00000556548 TMEM266Q2M3C6 531 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 KIF4BQ2VIQ3 1234 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 HAS1Q92839 578 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 FEZ1Q99689 392 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 DEFB129Q9H1M3 183 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 CTNND2Q9UQB3 1225 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 GDAQ9Y2T3 454 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 OPLAHO14841 1288 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 ASNSP08243 561 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 TNFAIP1Q13829 316 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 NUDT12Q9BQG2 462 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 GLT8D2Q9H1C3 349 aa20.62■□□□□ 0.89
SDR39U1-220ENST00000556548 ERCC5P28715 1186 aaPredicted RBP20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 MAP3K10Q02779 954 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 NOLC1Q14978 699 aaKnown RBP eCLIP20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 KBTBD4Q9NVX7 518 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 SYNPO2Q9UMS6 1093 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 FZD1Q9UP38 647 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 SYNRGQ9UMZ2 1314 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 FXR2P51116 673 aaKnown RBP eCLIP20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 KIAA1524Q8TCG1 905 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 TBC1D5Q92609 795 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 CALML4Q96GE6 196 aa20.61■□□□□ 0.89
SDR39U1-220ENST00000556548 FCHSD1Q86WN1 690 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 MYH7BA7E2Y1 1941 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 ARHGAP4P98171 946 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 GRB10Q13322 594 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 KMT5BQ4FZB7 885 aa20.6■□□□□ 0.89
SDR39U1-220ENST00000556548 ZNF18P17022 549 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 SNX29Q8TEQ0 813 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 CDK5RAP3Q96JB5 506 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms