RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 USP17L2Q6R6M4 530 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 CYP26C1Q6V0L0 522 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 CABP7Q86V35 215 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 IRF2BP1Q8IU81 584 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 TMTC1Q8IUR5 882 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 REXO1Q8N1G1 1221 aaKnown RBP6.06□□□□□ -1.44
GPHN-213ENST00000556501 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
GPHN-213ENST00000556501 RASSF8Q8NHQ8 419 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 CCDC47Q96A33 483 aaKnown RBP6.06□□□□□ -1.44
GPHN-213ENST00000556501 DHTKD1Q96HY7 919 aaPredicted RBP6.06□□□□□ -1.44
GPHN-213ENST00000556501 MS4A4AQ96JQ5 239 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 TRIM47Q96LD4 638 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 PIGSQ96S52 555 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 C7orf25Q9BPX7 421 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 CARD6Q9BX69 1037 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 CPVLQ9H3G5 476 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 ABHD10Q9NUJ1 306 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 MTMR4Q9NYA4 1195 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 STK17AQ9UEE5 414 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 SWAP70Q9UH65 585 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 TRPC5Q9UL62 973 aaPredicted RBP6.06□□□□□ -1.44
GPHN-213ENST00000556501 PSME4Q14997 1843 aa6.06□□□□□ -1.44
GPHN-213ENST00000556501 BICDL2A1A5D9 508 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 TRIM49BA6NDI0 452 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 C6orf229H3BNL8 230 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 MAP3K13O43283 966 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 KIF5CO60282 957 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 CCNT1O60563 726 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 AKR1B1P15121 316 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 CCNE1P24864 410 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 HMGB2P26583 209 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 ADCY7P51828 1080 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 PMS1P54277 932 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 ERVK-24P63145 666 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 GTF2IP78347 998 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 PPP2R3AQ06190 1150 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 GABPB1Q06547 395 aaPredicted RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 DMTNQ08495 405 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 TUBB2AQ13885 445 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 TXNRD1Q16881 649 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 LETM2Q2VYF4 491 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 ARHGAP29Q52LW3 1261 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 UTP14CQ5TAP6 766 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 CNNM4Q6P4Q7 775 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 DPP8Q6V1X1 898 aaPredicted RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 RSRC2Q7L4I2 434 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 FAM114A1Q8IWE2 563 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 KRT222Q8N1A0 295 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 CERS5Q8N5B7 392 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 MB21D1Q8N884 522 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 ZNF507Q8TCN5 953 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 TBCKQ8TEA7 893 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 UBXN4Q92575 508 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 P2RX5Q93086 422 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 DNAJC7Q99615 494 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 DUSP9Q99956 384 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 MMTAG2Q9BU76 263 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 TUBB2BQ9BVA1 445 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 TRIM9Q9C026 710 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 VPS16Q9H269 839 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 DDX4Q9NQI0 724 aaKnown RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 ARGLU1Q9NWB6 273 aaPredicted RBP6.05□□□□□ -1.44
GPHN-213ENST00000556501 ZNF446Q9NWS9 450 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 MYO1AQ9UBC5 1043 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 MTMR7Q9Y216 660 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 ATP6V0A2Q9Y487 856 aa6.05□□□□□ -1.44
GPHN-213ENST00000556501 ATAD5Q96QE3 1844 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ABCB11O95342 1321 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 SCN9AQ15858 1988 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 PNMA6FA0A0J9YX94 578 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 RNF225M0QZC1 329 aaPredicted RBP6.04□□□□□ -1.44
GPHN-213ENST00000556501 COBLO75128 1261 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
GPHN-213ENST00000556501 TTLL1O95922 423 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 SRGNP10124 158 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 NPR1P16066 1061 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ZSCAN20P17040 1043 aaPredicted RBP6.04□□□□□ -1.44
GPHN-213ENST00000556501 SHMT1P34896 483 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 HSPA1LP34931 641 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 KRT9P35527 623 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ARHGAP25P42331 645 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 DNM2P50570 870 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 CLCN6P51797 869 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ASIC1P78348 528 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 AMPD3Q01432 767 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 UBXN1Q04323 297 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 ZNF543Q08ER8 600 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 MKRN3Q13064 507 aaKnown RBP6.04□□□□□ -1.44
GPHN-213ENST00000556501 GRB10Q13322 594 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 PICALMQ13492 652 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 BMS1Q14692 1282 aaKnown RBP6.04□□□□□ -1.44
GPHN-213ENST00000556501 CALCRLQ16602 461 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 MEA1Q16626 185 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 TMEM266Q2M3C6 531 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 TMEM119Q4V9L6 283 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 JAKMIP3Q5VZ66 844 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 FOXR2Q6PJQ5 311 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 HHIPL2Q6UWX4 724 aa6.04□□□□□ -1.44
GPHN-213ENST00000556501 LRRC47Q8N1G4 583 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms