RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	WDR18	Q9BV38	432 aa		5.89	□□□□□ -1.47
ATXN3-238	ENST00000556288	NOC4L	Q9BVI4	516 aa	Known RBP	5.89	□□□□□ -1.47
ATXN3-238	ENST00000556288	BRIP1	Q9BX63	1249 aa		5.89	□□□□□ -1.47
ATXN3-238	ENST00000556288	TMX4	Q9H1E5	349 aa	Predicted RBP	5.89	□□□□□ -1.47
ATXN3-238	ENST00000556288	AP4E1	Q9UPM8	1137 aa		5.89	□□□□□ -1.47
ATXN3-238	ENST00000556288	KIAA1551	Q9HCM1	1747 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	POLR2A	P24928	1970 aa	Known RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	PI4KAP2	A4QPH2	592 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	DHX15	O43143	795 aa	Known RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	ADH5	P11766	374 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	RLBP1	P12271	317 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	BMP3	P12645	472 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	SLFN5	Q08AF3	891 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	UVSSA	Q2YD98	709 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	PARP10	Q53GL7	1025 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	KSR2	Q6VAB6	950 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	NLRP10	Q86W26	655 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	PI4KAP1	Q8N8J0	262 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	GPBAR1	Q8TDU6	330 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	FAM89A	Q96GI7	184 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	RBM17	Q96I25	401 aa	Known RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	BACH2	Q9BYV9	841 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	PPP1R9A	Q9ULJ8	1098 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	COL11A2	P13942	1736 aa	Predicted RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	DDX60	Q8IY21	1712 aa	Known RBP	5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288	FER1L6	Q2WGJ9	1857 aa		5.88	□□□□□ -1.47
ATXN3-238	ENST00000556288		F6X3S4	739 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	NPR1	P16066	1061 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	KCNA3	P22001	575 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	ALDH1B1	P30837	517 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	ASPA	P45381	313 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	LIG3	P49916	1009 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	TSNAXIP1	Q2TAA8	658 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	DDX46	Q7L014	1031 aa	Known RBP	5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	MRRF	Q96E11	262 aa	Known RBP	5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	MASTL	Q96GX5	879 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	MYRFL	Q96LU7	910 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	METTL22	Q9BUU2	404 aa	Predicted RBP	5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	KCNF1	Q9H3M0	494 aa		5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	CWC25	Q9NXE8	425 aa	Predicted RBP	5.87	□□□□□ -1.47
ATXN3-238	ENST00000556288	PXDNL	A1KZ92	1463 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	UBN2	Q6ZU65	1347 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SH3TC1	Q8TE82	1336 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SYNGAP1	Q96PV0	1343 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	UNCX	A6NJT0	531 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	IRS4	O14654	1257 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	DYRK3	O43781	588 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	H2AFB1	P0C5Y9	115 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	H2AFB2	P0C5Z0	115 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SRGN	P10124	158 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	RPS26	P62854	115 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	ID3	Q02535	119 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	CWF19L2	Q2TBE0	894 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	KIF4B	Q2VIQ3	1234 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SGO2	Q562F6	1265 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SCARA3	Q6AZY7	606 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	STYK1	Q6J9G0	422 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	AGMO	Q6ZNB7	445 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	PRR23C	Q6ZRP0	262 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	RELL1	Q8IUW5	271 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	FAM20C	Q8IXL6	584 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	FBLIM1	Q8WUP2	373 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	FRAT1	Q92837	279 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	SMC4	Q9NTJ3	1288 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	STOML1	Q9UBI4	398 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	PCDHA4	Q9UN74	947 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	TLR6	Q9Y2C9	796 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	PCDHB5	Q9Y5E4	795 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	ACTL7B	Q9Y614	415 aa		5.86	□□□□□ -1.47
ATXN3-238	ENST00000556288	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	C10orf71	Q711Q0	1435 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	TMPRSS2	O15393	492 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	NTSR2	O95665	410 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	TFE3	P19532	575 aa	Predicted RBP	5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	MAP4	P27816	1152 aa	Known RBP	5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	GBP2	P32456	591 aa	Predicted RBP	5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	PTPN11	Q06124	597 aa	Predicted RBP	5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	PWP1	Q13610	501 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	LDLRAD1	Q5T700	205 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	C9orf131	Q5VYM1	1079 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	OLFM4	Q6UX06	510 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	BEND4	Q6ZU67	534 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	UBE3B	Q7Z3V4	1068 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	LRP10	Q7Z4F1	713 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	CCDC191	Q8NCU4	936 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	PHC3	Q8NDX5	983 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	DNAAF4	Q8WXU2	420 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	SSH1	Q8WYL5	1049 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	ISCA1	Q9BUE6	129 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	RSRP1	Q9BUV0	290 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	KRTAP4-9	Q9BYQ8	210 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	MIR1-1HG	Q9H1L0	117 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	FAM105A	Q9NUU6	356 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	CACNA2D2	Q9NY47	1150 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	CRIM1	Q9NZV1	1036 aa		5.85	□□□□□ -1.47
ATXN3-238	ENST00000556288	RNF181	Q9P0P0	153 aa		5.85	□□□□□ -1.47

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