RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TTLL7Q6ZT98 887 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 SLITRK4Q8IW52 837 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 FIBCD1Q8N539 461 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 ADAMTS17Q8TE56 1095 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 ZBTB8AQ96BR9 441 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 SCAND2PQ9GZW5 306 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-218ENST00000556256 FHOD1Q9Y613 1164 aa6.36□□□□□ -1.39
SCFD1-218ENST00000556256 OVOL3O00110 214 aa6.35□□□□□ -1.39
SCFD1-218ENST00000556256 PPFIBP1Q86W92 1011 aa6.35□□□□□ -1.39
SCFD1-218ENST00000556256 NKD1Q969G9 470 aa6.35□□□□□ -1.39
SCFD1-218ENST00000556256 FBLN5Q9UBX5 448 aa6.35□□□□□ -1.39
SCFD1-218ENST00000556256 PPP1R11O60927 126 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-218ENST00000556256 CD3EP07766 207 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 CD247P20963 164 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 HMGA2P52926 109 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
SCFD1-218ENST00000556256 SLC9A5Q14940 896 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-218ENST00000556256 GGT7Q9UJ14 662 aa6.34□□□□□ -1.39
SCFD1-218ENST00000556256 SF3B6Q9Y3B4 125 aaKnown RBP6.34□□□□□ -1.39
SCFD1-218ENST00000556256 TP53P04637 393 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-218ENST00000556256 C6P13671 934 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 POU4F1Q01851 419 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 TRIM26Q12899 539 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-218ENST00000556256 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 CABP7Q86V35 215 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 LZTR1Q8N653 840 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 SMARCC1Q92922 1105 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-218ENST00000556256 DVL3Q92997 716 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-218ENST00000556256 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 PEX11GQ96HA9 241 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 NT5C1AQ9BXI3 368 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 ZNF451Q9Y4E5 1061 aa6.33□□□□□ -1.4
SCFD1-218ENST00000556256 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 SPRED1Q7Z699 444 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 CHST13Q8NET6 341 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 NOL6Q9H6R4 1146 aaKnown RBP6.32□□□□□ -1.4
SCFD1-218ENST00000556256 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 NUDT5Q9UKK9 219 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
SCFD1-218ENST00000556256 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-218ENST00000556256 SLPIP03973 132 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 TACR2P21452 398 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 ITGAEP38570 1179 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 GDF5P43026 501 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 LGI4Q8N135 537 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 Q8N1X5 172 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 NETO2Q8NC67 525 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 SH3RF3Q8TEJ3 882 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-218ENST00000556256 SYT3Q9BQG1 590 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 ST6GALNAC2Q9UJ37 374 aa6.31□□□□□ -1.4
SCFD1-218ENST00000556256 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 EEF1DP3Q658K8 133 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 LIMS2Q7Z4I7 341 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-218ENST00000556256 MTA3Q9BTC8 594 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 MCMBPQ9BTE3 642 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 MRIQ9BWK5 157 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 ZNRF3Q9ULT6 936 aa6.3□□□□□ -1.4
SCFD1-218ENST00000556256 DIS3Q9Y2L1 958 aaKnown RBP6.3□□□□□ -1.4
SCFD1-218ENST00000556256 ZNF536O15090 1300 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 A0A087WZG4 1122 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 C8BP07358 591 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 CYP2C8P10632 490 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 ITGA4P13612 1032 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
SCFD1-218ENST00000556256 ACVRL1P37023 503 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 ZYXQ15942 572 aaKnown RBP6.29□□□□□ -1.4
SCFD1-218ENST00000556256 GLB1LQ6UWU2 654 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 ZFPM1Q8IX07 1006 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-218ENST00000556256 MENTQ9BUN1 341 aa6.29□□□□□ -1.4
SCFD1-218ENST00000556256 MROH6A6NGR9 719 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 THBS2P35442 1172 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 KRTAP1-1Q07627 177 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 CDSNQ15517 529 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 MCTP2Q6DN12 878 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 FAM124AQ86V42 546 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 GULP1Q9UBP9 304 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 SIT1Q9Y3P8 196 aa6.28□□□□□ -1.4
SCFD1-218ENST00000556256 AURKAO14965 403 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 TCEAL1Q15170 157 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 FAM26FQ5R3K3 315 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 BORAQ6PGQ7 559 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 UNC5AQ6ZN44 842 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 CPNE8Q86YQ8 564 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 USP33Q8TEY7 942 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 KISS1RQ969F8 398 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-218ENST00000556256 TM9SF2Q99805 663 aa6.27□□□□□ -1.41
SCFD1-218ENST00000556256 ZNF214Q9UL59 606 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms