RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 PWP2Q15269 919 aaKnown RBP18.25■□□□□ 0.51
SUPT16H-205ENST00000556217 MORC4Q8TE76 937 aa18.25■□□□□ 0.51
SUPT16H-205ENST00000556217 POLR3EQ9NVU0 708 aa18.25■□□□□ 0.51
SUPT16H-205ENST00000556217 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
SUPT16H-205ENST00000556217 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
SUPT16H-205ENST00000556217 NMT2O60551 498 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 SUPT20HL2P0C7V6 817 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 MX1P20591 662 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 PSMC6P62333 389 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 RANBP17Q9H2T7 1088 aaKnown RBP18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 ANAPC4Q9UJX5 808 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 CHD7Q9P2D1 2997 aa18.24■□□□□ 0.51
SUPT16H-205ENST00000556217 PFKMP08237 780 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 CPT1AP50416 773 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 PPP2R2DQ66LE6 453 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 MPHOSPH6Q99547 160 aaKnown RBP18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 LRFN3Q9BTN0 628 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 WDR11Q9BZH6 1224 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 YBX2Q9Y2T7 364 aaKnown RBP18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 DDX49Q9Y6V7 483 aaKnown RBP18.23■□□□□ 0.51
SUPT16H-205ENST00000556217 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 ORC4O43929 436 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 PTGS1P23219 599 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 BAATQ14032 418 aaPredicted RBP18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 BRDTQ58F21 947 aaPredicted RBP18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 SYDE2Q5VT97 1194 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 INCENPQ9NQS7 918 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 TOMM22Q9NS69 142 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 RAD50Q92878 1312 aa18.22■□□□□ 0.51
SUPT16H-205ENST00000556217 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 FOXP2O15409 715 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 TOP1P11387 765 aaKnown RBP18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 NOVP48745 357 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 RASGRP2Q7LDG7 609 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 SCLYQ96I15 445 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 MUC6Q6W4X9 2439 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 TNKSO95271 1327 aa18.21■□□□□ 0.51
SUPT16H-205ENST00000556217 MYL3P08590 195 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 ACTN1P12814 892 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 SLC16A2P36021 539 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 RABGGTBP53611 331 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 PURAQ00577 322 aaKnown RBP18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 TMEM31Q5JXX7 168 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 MTG1Q9BT17 334 aaPredicted RBP18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 TRANK1O15050 2925 aa18.2■□□□□ 0.5
SUPT16H-205ENST00000556217 REV3LO60673 3130 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 RBM47A0AV96 593 aaKnown RBP18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 XIRP2A4UGR9 3374 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 B4DLN1 442 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 NFIBO00712 420 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 NKRFO15226 690 aaKnown RBP eCLIP18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 KPNA6O60684 536 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 FGRP09769 529 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 RFC2P35250 354 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 MRPL12P52815 198 aaKnown RBP18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 TFF2Q03403 129 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 PDE4DQ08499 809 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 ALX1Q15699 326 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 RNF207Q6ZRF8 634 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 EPHX3Q9H6B9 360 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
SUPT16H-205ENST00000556217 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 CYP2C9P11712 490 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 CALML3P27482 149 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 SKIV2LQ15477 1246 aaKnown RBP18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 RRP12Q5JTH9 1297 aaKnown RBP18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 VPS53Q5VIR6 699 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 TMEM47Q9BQJ4 181 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 TCP11L1Q9NUJ3 509 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 FRMPD2Q68DX3 1309 aaPredicted RBP18.18■□□□□ 0.5
SUPT16H-205ENST00000556217 MYOGP15173 224 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 KCNQ1P51787 676 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 TTLL4Q14679 1199 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 DEFB128Q7Z7B8 93 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms