RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CLEC4DQ8WXI8 215 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 TNFRSF25Q93038 417 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 RNF146Q9NTX7 359 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 M0R2N6 131 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 OPLAHO14841 1288 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 CNMDO75829 334 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 CFBP00751 764 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
TMEM260-208ENST00000555905 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 ERVK-24P63145 666 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 CCNA1P78396 465 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 AP3B2Q13367 1082 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMEM260-208ENST00000555905 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
TMEM260-208ENST00000555905 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 MYSM1Q5VVJ2 828 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 JAKMIP3Q5VZ66 844 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 PIK3AP1Q6ZUJ8 805 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 RASGRP4Q8TDF6 673 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 MAF1Q9H063 256 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 ACAD9Q9H845 621 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 MAP3K20Q9NYL2 800 aaKnown RBP12.61□□□□□ -0.39
TMEM260-208ENST00000555905 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
TMEM260-208ENST00000555905 SPDYE3A6NKU9 549 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 NFIBO00712 420 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 MEIS2O14770 477 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 ADAMTS3O15072 1205 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 AOC2O75106 756 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 ALDH1A1P00352 501 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 TRAPPC10P48553 1259 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 CLK2P49760 499 aaKnown RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 HSD17B4P51659 736 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 KRT85P78386 507 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 RILPL1Q5EBL4 403 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 FAM173BQ6P4H8 233 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 RNF207Q6ZRF8 634 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 NCAPG2Q86XI2 1143 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
TMEM260-208ENST00000555905 MROH8Q9H579 483 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
TMEM260-208ENST00000555905 PEX10O60683 326 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
TMEM260-208ENST00000555905 GHRHRQ02643 423 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
TMEM260-208ENST00000555905 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 ZIC5Q96T25 663 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 PFASO15067 1338 aa12.59□□□□□ -0.39
TMEM260-208ENST00000555905 TCHHQ07283 1943 aa12.58□□□□□ -0.39
TMEM260-208ENST00000555905 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 ERCC3P19447 782 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 MAP2K2P36507 400 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 VEGFBP49765 207 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 NUBP1P53384 320 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 CSPP1Q1MSJ5 1256 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 FAM110CQ1W6H9 321 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 INF2Q27J81 1249 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 Q3C1V9 767 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 NOM1Q5C9Z4 860 aaKnown RBP12.58□□□□□ -0.4
TMEM260-208ENST00000555905 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
TMEM260-208ENST00000555905 WDR78Q5VTH9 848 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 TBCKQ8TEA7 893 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 ANO3Q9BYT9 981 aa12.58□□□□□ -0.4
TMEM260-208ENST00000555905 SCAND2PQ9GZW5 306 aaPredicted RBP12.58□□□□□ -0.4
TMEM260-208ENST00000555905 TFIP11Q9UBB9 837 aaKnown RBP12.58□□□□□ -0.4
TMEM260-208ENST00000555905 CA12O43570 354 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 TLR2O60603 784 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 TOB1P50616 345 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 RPS6P62753 249 aaKnown RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 BAATQ14032 418 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-208ENST00000555905 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
TMEM260-208ENST00000555905 NEK8Q86SG6 692 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms