RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TLR3O15455 904 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 CD4P01730 458 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 IRX5P78411 483 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 ASPRV1Q53RT3 343 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 ZNF697Q5TEC3 545 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 RNF207Q6ZRF8 634 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 KAT14Q9H8E8 782 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 LCTP09848 1927 aa14.88□□□□□ -0.03
HNRNPC-221ENST00000555883 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 B4DLN1 442 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 NKRFO15226 690 aaKnown RBP eCLIP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 MRPL12P52815 198 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 EPHB4P54760 987 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 RPS6P62753 249 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 SLC30A10Q6XR72 485 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 ENAHQ8N8S7 591 aaPredicted RBP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 VTI1AQ96AJ9 217 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 ZKSCAN3Q9BRR0 538 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 ZSWIM5Q9P217 1185 aa14.87□□□□□ -0.03
HNRNPC-221ENST00000555883 B4E1Z4 1266 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 DYNC1LI2O43237 492 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 BEX3Q00994 111 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 PPIGQ13427 754 aaKnown RBP eCLIP14.86□□□□□ -0.031e-9■□□□□ 9.6
HNRNPC-221ENST00000555883 CXCL17Q6UXB2 119 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 KIAA1211Q6ZU35 1233 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 TMEM199Q8N511 208 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 GUCD1Q96NT3 240 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 PURBQ96QR8 312 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 CDH23Q9H251 3354 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 TNKSO95271 1327 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 ABCB11O95342 1321 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 UNC80Q8N2C7 3258 aa14.86□□□□□ -0.03
HNRNPC-221ENST00000555883 CALML3P27482 149 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 PDE4AP27815 886 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 CPT1AP50416 773 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 ITGA7Q13683 1181 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 WDR11Q9BZH6 1224 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 POLR3EQ9NVU0 708 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 GRIN2DO15399 1336 aa14.85□□□□□ -0.03
HNRNPC-221ENST00000555883 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 GOLGA8HP0CJ92 632 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 PDE4DQ08499 809 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 CDC37Q16543 378 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 RASIP1Q5U651 963 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 PSRC1Q6PGN9 363 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 MCF2L2Q86YR7 1114 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 ADGRF4Q8IZF3 695 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 SCFD2Q8WU76 684 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 IL25Q9H293 177 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 SEMA6BQ9H3T3 888 aa14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
HNRNPC-221ENST00000555883 EYSQ5T1H1 3165 aa14.83□□□□□ -0.03
HNRNPC-221ENST00000555883 KPNA6O60684 536 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 PARP1P09874 1014 aaKnown RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 PURAQ00577 322 aaKnown RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 GHRHRQ02643 423 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 PPP2R5BQ15173 497 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 SEC23AQ15436 765 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 BRDTQ58F21 947 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 IFIT1BQ5T764 474 aaKnown RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 IWS1Q96ST2 819 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.042e-8■■■□□ 14.8
HNRNPC-221ENST00000555883 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-221ENST00000555883 A6NJR5 290 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 SUPT20HL2P0C7V6 817 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 CSF2RAP15509 400 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 CHMLP26374 656 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 TRDNQ13061 729 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 USH1GQ495M9 461 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 TMEM240Q5SV17 173 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 TMEM63BQ5T3F8 832 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 C16orf59Q7L2K0 433 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 NSUN6Q8TEA1 469 aaKnown RBP14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 MTMR8Q96EF0 704 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 HIPK3Q9H422 1215 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 JMJD4Q9H9V9 463 aa14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 MRPL11Q9Y3B7 192 aaKnown RBP14.82□□□□□ -0.04
HNRNPC-221ENST00000555883 B4GALT4O60513 344 aa14.81□□□□□ -0.04
HNRNPC-221ENST00000555883 TRAF1Q13077 416 aa14.81□□□□□ -0.04
HNRNPC-221ENST00000555883 TTLL4Q14679 1199 aa14.81□□□□□ -0.04
HNRNPC-221ENST00000555883 QRICH1Q2TAL8 776 aa14.81□□□□□ -0.04
HNRNPC-221ENST00000555883 FBXO11Q86XK2 927 aa14.81□□□□□ -0.04
HNRNPC-221ENST00000555883 OR6J1Q8NGC5 347 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms