RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PCDHA6Q9UN73 950 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 JAG2Q9Y219 1238 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 PCDHA8Q9Y5H6 950 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 FAM205AQ6ZU69 1335 aa7.85□□□□□ -1.15
TDP1-213ENST00000555880 ERICH4A6NGS2 130 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 STXBP3O00186 592 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 RHOBTB3O94955 611 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 NDUFA10O95299 355 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 VEGFAP15692 232 aaPredicted RBP7.84□□□□□ -1.15
TDP1-213ENST00000555880 GNA11P29992 359 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 CDC25AP30304 524 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 CYP2C19P33261 490 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 DNM2P50570 870 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 NAPAP54920 295 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 KRT83P78385 493 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 AMPD3Q01432 767 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 HDXQ7Z353 690 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 TXLNBQ8N3L3 684 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 GIMAP8Q8ND71 665 aaPredicted RBP7.84□□□□□ -1.15
TDP1-213ENST00000555880 SH3RF3Q8TEJ3 882 aaPredicted RBP7.84□□□□□ -1.15
TDP1-213ENST00000555880 DYNLL2Q96FJ2 89 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 DNAJC7Q99615 494 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 NUP58Q9BVL2 599 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 HAUS4Q9H6D7 363 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 C6orf50Q9HD87 102 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 IL17RBQ9NRM6 502 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 KBTBD4Q9NVX7 518 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 CALCOCO1Q9P1Z2 691 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 RTCBQ9Y3I0 505 aaKnown RBP7.84□□□□□ -1.15
TDP1-213ENST00000555880 EPN1Q9Y6I3 576 aaPredicted RBP7.84□□□□□ -1.15
TDP1-213ENST00000555880 SBF2Q86WG5 1849 aa7.84□□□□□ -1.15
TDP1-213ENST00000555880 TTC26A0AVF1 554 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 M0R2N6 131 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 GNPATO15228 680 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 SASH3O75995 380 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 OR52Z1P0C646 297 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 TRIM21P19474 475 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 MCM3P25205 808 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 HMGB2P26583 209 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 CYLC1P35663 651 aaPredicted RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 ORC2Q13416 577 aaPredicted RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 MFSD10Q14728 455 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 NONOQ15233 471 aaKnown RBP eCLIP7.83□□□□□ -1.16
TDP1-213ENST00000555880 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 KIAA1328Q86T90 577 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CABP7Q86V35 215 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CSGALNACT2Q8N6G5 542 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 RETREG2Q8NC44 543 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 MSANTD4Q8NCY6 345 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 IQCDQ96DY2 449 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 RRP36Q96EU6 259 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 SPZ1Q9BXG8 430 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 FUT8Q9BYC5 575 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ACBD3Q9H3P7 528 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 QTRT2Q9H974 415 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 MYO6Q9UM54 1294 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CAPN11Q9UMQ6 739 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 GUCA1BQ9UMX6 200 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 LEMD3Q9Y2U8 911 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 A0A0U1RQJ8 604 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 PALM3A6NDB9 673 aaPredicted RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 TRIM49BA6NDI0 452 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 PP2D1A8MPX8 630 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 KLRF2D3W0D1 207 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ADAMTS3O15072 1205 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 KRT86O43790 486 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CCNT1O60563 726 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 PLCG1P19174 1290 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ARHGAP25P42331 645 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 PPP4CP60510 307 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ASIC1P78348 528 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 NAALADL2Q58DX5 795 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 FKBP15Q5T1M5 1219 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 FAM182BQ5T319 152 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CNNM4Q6P4Q7 775 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 TGFBRAP1Q8WUH2 860 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ATRIPQ8WXE1 791 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 CALML4Q96GE6 196 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 PLIN2Q99541 437 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 TMEM47Q9BQJ4 181 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 TUBGCP2Q9BSJ2 902 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 UBXN6Q9BZV1 441 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ZMYND12Q9H0C1 365 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 TMEM60Q9H2L4 133 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 ANKZF1Q9H8Y5 726 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 SRP68Q9UHB9 627 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
TDP1-213ENST00000555880 RAB21Q9UL25 225 aa7.83□□□□□ -1.16
TDP1-213ENST00000555880 PSMD14O00487 310 aa7.82□□□□□ -1.16
TDP1-213ENST00000555880 RHOXF2BP0C7M4 288 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms