RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 MTMR7Q9Y216 660 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
MTHFD1-211ENST00000555709 JAK2O60674 1132 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 IFNAR1P17181 557 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 SLC1A4P43007 532 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 USP14P54578 494 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 CCDC85BQ15834 202 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 GPATCH4Q5T3I0 446 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 GJC2Q5T442 439 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 SPICE1Q8N0Z3 855 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 CXXC1Q9P0U4 656 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 STK36Q9NRP7 1315 aa13.59□□□□□ -0.23
MTHFD1-211ENST00000555709 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 C19orf81C9J6K1 198 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 CPLX1O14810 134 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 CDKL5O76039 1030 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 IGHA2P01877 340 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 BMP3P12645 472 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 VCAM1P19320 739 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 HOXA7P31268 230 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 GNAQP50148 359 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 TRPV1Q8NER1 839 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
MTHFD1-211ENST00000555709 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 CYTH3O43739 400 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 RAD21O60216 631 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 DTNBO60941 627 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 SMARCA1P28370 1054 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 HERVK_113P62684 666 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 CPLX2Q6PUV4 134 aaKnown RBP13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
MTHFD1-211ENST00000555709 KIAA0355O15063 1070 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 GPR37L1O60883 481 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 PBX2P40425 430 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 ERVK-9P63128 1117 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 ERVK-24P63145 666 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 TLE2Q04725 743 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 PHKBQ93100 1093 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 RIOX1Q9H6W3 641 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
MTHFD1-211ENST00000555709 PLA2G6O60733 806 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 CYBAP13498 195 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 GJB2P29033 226 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 CNGA1P29973 690 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 DDIT3P35638 169 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 MRE11P49959 708 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 KCNQ1P51787 676 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 TFF2Q03403 129 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 MTMR8Q96EF0 704 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 UBA5Q9GZZ9 404 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 RPAP3Q9H6T3 665 aaPredicted RBP13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 SMC3Q9UQE7 1217 aa13.55□□□□□ -0.24
MTHFD1-211ENST00000555709 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 HOXC6P09630 235 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 CYP2C19P33261 490 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 SLC16A2P36021 539 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 STAT2P52630 851 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 FPGSQ05932 587 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 CCDC82Q8N4S0 544 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 SLC26A6Q9BXS9 759 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 JMJD4Q9H9V9 463 aa13.54□□□□□ -0.24
MTHFD1-211ENST00000555709 FBXO28Q9NVF7 368 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms