RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
SHMT2-219ENST00000555563 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
SHMT2-219ENST00000555563 MRPL11Q9Y3B7 192 aaKnown RBP15.93■□□□□ 0.14
SHMT2-219ENST00000555563 SYNRGQ9UMZ2 1314 aa15.93■□□□□ 0.14
SHMT2-219ENST00000555563 KBTBD13C9JR72 458 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 H0YGN5 161 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 OPLAHO14841 1288 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 HMGB1P09429 215 aaKnown RBP15.92■□□□□ 0.14
SHMT2-219ENST00000555563 CALM1P0DP23 149 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 CALM2P0DP24 149 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 CALM3P0DP25 149 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 APOA5Q6Q788 366 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 EEPD1Q7L9B9 569 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 TBC1D5Q92609 795 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 PCDHA1Q9Y5I3 950 aa15.92■□□□□ 0.14
SHMT2-219ENST00000555563 LOC102724159A0A0B4J2E5 919 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 PNMA6FA0A0J9YX94 578 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 EPB41L2O43491 1005 aaKnown RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 ADAMTS4O75173 837 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 GNAQP50148 359 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 PWP2Q15269 919 aaKnown RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 MCF2L2Q86YR7 1114 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 DNERQ8NFT8 737 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 SYTL5Q8TDW5 730 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 BRPF3Q9ULD4 1205 aa15.91■□□□□ 0.14
SHMT2-219ENST00000555563 BAZ2BQ9UIF8 2168 aaKnown RBP15.91■□□□□ 0.14
SHMT2-219ENST00000555563 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 EVI5O60447 810 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 DUSP11O75319 330 aaKnown RBP15.9■□□□□ 0.14
SHMT2-219ENST00000555563 EDNRBP24530 442 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 ADCYAP1R1P41586 468 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 GHRHRQ02643 423 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 LRRC26Q2I0M4 334 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 TMTC3Q6ZXV5 915 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 RNF180Q86T96 592 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 C7orf61Q8IZ16 206 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
SHMT2-219ENST00000555563 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
SHMT2-219ENST00000555563 FANCBQ8NB91 859 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 USP26Q9BXU7 913 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 MAF1Q9H063 256 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 VTA1Q9NP79 307 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 PDGFCQ9NRA1 345 aa15.9■□□□□ 0.14
SHMT2-219ENST00000555563 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 CFBP00751 764 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
SHMT2-219ENST00000555563 PTGS1P23219 599 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 HSD17B4P51659 736 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-219ENST00000555563 TNFAIP2Q03169 654 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 PDE4DQ08499 809 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 SYNE3Q6ZMZ3 975 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 RRP36Q96EU6 259 aaKnown RBP15.89■□□□□ 0.13
SHMT2-219ENST00000555563 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
SHMT2-219ENST00000555563 SEC63Q9UGP8 760 aaKnown RBP15.89■□□□□ 0.13
SHMT2-219ENST00000555563 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
SHMT2-219ENST00000555563 ZBTB43O43298 467 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 C6orf222P0C671 652 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 SMPD1P17405 629 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 FGD1P98174 961 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 TRAF1Q13077 416 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 RTN1Q16799 776 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 Q6ZUG5 572 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 NOL8Q76FK4 1167 aaKnown RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 TLK2Q86UE8 772 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 FERMT2Q96AC1 680 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 TAAR1Q96RJ0 339 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 MPHOSPH6Q99547 160 aaKnown RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 GNEQ9Y223 722 aaKnown RBP15.88■□□□□ 0.13
SHMT2-219ENST00000555563 NR2E3Q9Y5X4 410 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
SHMT2-219ENST00000555563 GOLGA8AA7E2F4 631 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 CTAGE5O15320 804 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 PSMA5P28066 241 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 CST5P28325 142 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-219ENST00000555563 GJA9P57773 515 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 TMEM63BQ5T3F8 832 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 IQSEC1Q6DN90 963 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 CCSAPQ6IQ19 270 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-219ENST00000555563 CCDC82Q8N4S0 544 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 NSUN6Q8TEA1 469 aaKnown RBP15.87■□□□□ 0.13
SHMT2-219ENST00000555563 BRF1Q92994 677 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 RMDN3Q96TC7 470 aa15.87■□□□□ 0.13
SHMT2-219ENST00000555563 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
SHMT2-219ENST00000555563 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-219ENST00000555563 A0A1W2PQ45 241 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms