RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZBTB5O15062 677 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 ADAMTS4O75173 837 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 DDAH1O94760 285 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 ADCYAP1R1P41586 468 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 LIFRP42702 1097 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 TAPT1Q6NXT6 567 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 NFXL1Q6ZNB6 911 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 FBXO16Q8IX29 292 aaPredicted RBP15.9■□□□□ 0.14
SNX6-203ENST00000555416 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
SNX6-203ENST00000555416 SYTL5Q8TDW5 730 aaPredicted RBP15.9■□□□□ 0.14
SNX6-203ENST00000555416 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
SNX6-203ENST00000555416 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 CTAGE5O15320 804 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 EVI5O60447 810 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
SNX6-203ENST00000555416 DHX32Q7L7V1 743 aaKnown RBP15.89■□□□□ 0.13
SNX6-203ENST00000555416 SGMS1Q86VZ5 419 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 C7orf61Q8IZ16 206 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 RGS22Q8NE09 1264 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 FERMT2Q96AC1 680 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 MAP3K14Q99558 947 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 AMNQ9BXJ7 453 aa15.89■□□□□ 0.13
SNX6-203ENST00000555416 DUSP11O75319 330 aaKnown RBP15.88■□□□□ 0.13
SNX6-203ENST00000555416 SMPD1P17405 629 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 EDNRBP24530 442 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
SNX6-203ENST00000555416 TMTC2Q8N394 836 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
SNX6-203ENST00000555416 USP26Q9BXU7 913 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 ZMYND8Q9ULU4 1186 aaPredicted RBP15.88■□□□□ 0.13
SNX6-203ENST00000555416 MRPL11Q9Y3B7 192 aaKnown RBP15.88■□□□□ 0.13
SNX6-203ENST00000555416 PCDHA1Q9Y5I3 950 aa15.88■□□□□ 0.13
SNX6-203ENST00000555416 PNMA6FA0A0J9YX94 578 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 hCG_1642624A0A1W2PR95 340 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 KBTBD13C9JR72 458 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 REC8O95072 547 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 APOA5Q6Q788 366 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 MICU3Q86XE3 530 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
SNX6-203ENST00000555416 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 UPF3AQ9H1J1 476 aaKnown RBP15.87■□□□□ 0.13
SNX6-203ENST00000555416 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
SNX6-203ENST00000555416 PHF24Q9UPV7 400 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 GNEQ9Y223 722 aaKnown RBP15.87■□□□□ 0.13
SNX6-203ENST00000555416 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
SNX6-203ENST00000555416 CFBP00751 764 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 SYN1P17600 705 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 HOXA13P31271 388 aaPredicted RBP15.86■□□□□ 0.13
SNX6-203ENST00000555416 HSD17B4P51659 736 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 KRT32Q14532 448 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 CCDC82Q8N4S0 544 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 FANCBQ8NB91 859 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 VTA1Q9NP79 307 aa15.86■□□□□ 0.13
SNX6-203ENST00000555416 FAM217BQ9NTX9 383 aaPredicted RBP15.86■□□□□ 0.13
SNX6-203ENST00000555416 RANBP2P49792 3224 aaKnown RBP15.85■□□□□ 0.13
SNX6-203ENST00000555416 A0A1W2PQ45 241 aaPredicted RBP15.85■□□□□ 0.13
SNX6-203ENST00000555416 A0A1W2PQY0 241 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 C6orf222P0C671 652 aaPredicted RBP15.85■□□□□ 0.13
SNX6-203ENST00000555416 KIF5BP33176 963 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 GJA9P57773 515 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 BEX3Q00994 111 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 GHRHRQ02643 423 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 FUT2Q10981 343 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 KCNA10Q16322 511 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 TMTC3Q6ZXV5 915 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 RNF180Q86T96 592 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 DNERQ8NFT8 737 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 COLQQ9Y215 455 aaPredicted RBP15.85■□□□□ 0.13
SNX6-203ENST00000555416 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
SNX6-203ENST00000555416 KLF18A0A0U1RQI7 1052 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 RBM47A0AV96 593 aaKnown RBP15.84■□□□□ 0.13
SNX6-203ENST00000555416 ARIH2O95376 493 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 EIF2AK2P19525 551 aaKnown RBP15.84■□□□□ 0.13
SNX6-203ENST00000555416 CST5P28325 142 aaPredicted RBP15.84■□□□□ 0.13
SNX6-203ENST00000555416 ACLYP53396 1101 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 RTP1P59025 263 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 PDE4DQ08499 809 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 IQSEC1Q6DN90 963 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 Q6ZUG5 572 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 NOL8Q76FK4 1167 aaKnown RBP15.84■□□□□ 0.13
SNX6-203ENST00000555416 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 MCF2L2Q86YR7 1114 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 RMDN3Q96TC7 470 aa15.84■□□□□ 0.13
SNX6-203ENST00000555416 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 DYNC1LI2O43237 492 aaPredicted RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 CALM1P0DP23 149 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 CALM2P0DP24 149 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 CALM3P0DP25 149 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 CASTP20810 708 aaKnown RBP15.83■□□□□ 0.12
SNX6-203ENST00000555416 RPS6KB1P23443 525 aa15.83■□□□□ 0.12
SNX6-203ENST00000555416 SMARCA1P28370 1054 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms