RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LCTP09848 1927 aa14.02□□□□□ -0.17
SRP54-206ENST00000555317 LOC102724159A0A0B4J2E5 919 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 SNAI1O95863 264 aaPredicted RBP14.01□□□□□ -0.17
SRP54-206ENST00000555317 CFBP00751 764 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 ALDH5A1P51649 535 aaPredicted RBP14.01□□□□□ -0.17
SRP54-206ENST00000555317 PDE4DQ08499 809 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 COL9A3Q14050 684 aaPredicted RBP14.01□□□□□ -0.17
SRP54-206ENST00000555317 PWP2Q15269 919 aaKnown RBP14.01□□□□□ -0.17
SRP54-206ENST00000555317 RTN1Q16799 776 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 APOA5Q6Q788 366 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 Q6ZUG5 572 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
SRP54-206ENST00000555317 MTMR8Q96EF0 704 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 FGD4Q96M96 766 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 SPC25Q9HBM1 224 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 XPNPEP3Q9NQH7 507 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
SRP54-206ENST00000555317 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
SRP54-206ENST00000555317 GOLGA8BA8MQT2 603 aa14□□□□□ -0.17
SRP54-206ENST00000555317 DNM1LO00429 736 aa14□□□□□ -0.17
SRP54-206ENST00000555317 PLEKHA8P1O95397 391 aa14□□□□□ -0.17
SRP54-206ENST00000555317 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
SRP54-206ENST00000555317 CPA1P15085 419 aa14□□□□□ -0.17
SRP54-206ENST00000555317 RPS6KB1P23443 525 aa14□□□□□ -0.17
SRP54-206ENST00000555317 SMARCA1P28370 1054 aa14□□□□□ -0.17
SRP54-206ENST00000555317 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
SRP54-206ENST00000555317 TMTC3Q6ZXV5 915 aa14□□□□□ -0.17
SRP54-206ENST00000555317 UBE2Q1Q7Z7E8 422 aa14□□□□□ -0.17
SRP54-206ENST00000555317 RNF180Q86T96 592 aa14□□□□□ -0.17
SRP54-206ENST00000555317 DNERQ8NFT8 737 aa14□□□□□ -0.17
SRP54-206ENST00000555317 VTA1Q9NP79 307 aa14□□□□□ -0.17
SRP54-206ENST00000555317 DNAH12Q6ZR08 3092 aa14□□□□□ -0.17
SRP54-206ENST00000555317 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 CYTH3O43739 400 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 METAP2P50579 478 aaKnown RBP eCLIP13.99□□□□□ -0.17
SRP54-206ENST00000555317 RCAN1P53805 252 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
SRP54-206ENST00000555317 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
SRP54-206ENST00000555317 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 NSUN6Q8TEA1 469 aaKnown RBP13.99□□□□□ -0.17
SRP54-206ENST00000555317 BRF1Q92994 677 aa13.99□□□□□ -0.17
SRP54-206ENST00000555317 PURBQ96QR8 312 aaKnown RBP13.99□□□□□ -0.17
SRP54-206ENST00000555317 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 GCOM1H8Y6P7 765 aaPredicted RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 EVI5O60447 810 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 PPP1R11O60927 126 aaPredicted RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 POLR2MP0CAP2 368 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 TNFAIP2Q03169 654 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 ARHGEF16Q5VV41 709 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 SAMD3Q8N6K7 520 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 CUL5Q93034 780 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 MAP3K20Q9NYL2 800 aaKnown RBP13.98□□□□□ -0.17
SRP54-206ENST00000555317 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 NR2E3Q9Y5X4 410 aa13.98□□□□□ -0.17
SRP54-206ENST00000555317 ASTN1O14525 1302 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 PGK1P00558 417 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
SRP54-206ENST00000555317 LRRC41Q15345 812 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 TM6SF1Q9BZW5 370 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
SRP54-206ENST00000555317 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
SRP54-206ENST00000555317 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 ADCYAP1R1P41586 468 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 HSD17B4P51659 736 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 ANAPC15P60006 121 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 PRPF38BQ5VTL8 546 aaKnown RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 HEATR3Q7Z4Q2 680 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 IWS1Q96ST2 819 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
SRP54-206ENST00000555317 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
SRP54-206ENST00000555317 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 ZEB2O60315 1214 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 COL6A1P12109 1028 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 AKAP17AQ02040 695 aaKnown RBP13.95□□□□□ -0.18
SRP54-206ENST00000555317 STXBP2Q15833 593 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
SRP54-206ENST00000555317 PCSK9Q8NBP7 692 aaKnown RBP13.95□□□□□ -0.18
SRP54-206ENST00000555317 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms