RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTECB2RU33 542 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 KMT5BQ4FZB7 885 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 CTAGE1Q96RT6 745 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
ARHGEF40-206ENST00000555232 CDR1P51861 262 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 RBL2Q08999 1139 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 MTF1Q14872 753 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 GPR162Q16538 588 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 GJC1P36383 396 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 EPC1Q9H2F5 836 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 TAOK3Q9H2K8 898 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 CNTNAP5Q8WYK1 1306 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 TCHHQ07283 1943 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 ORC4O43929 436 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PDHBP11177 359 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PRCPP42785 496 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 ARHGAP44Q17R89 818 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 NBPF9Q3BBW0 867 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 CCDC65Q8IXS2 484 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PCDHA6Q9UN73 950 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 PCDHA8Q9Y5H6 950 aa13.6□□□□□ -0.23
ARHGEF40-206ENST00000555232 SPAG1Q07617 926 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 PKN1Q16512 942 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 CRAMP1Q96RY5 1269 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 BHMT2Q9H2M3 363 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 RGL1Q9NZL6 768 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 ARHGEF35A5YM69 484 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 STAT2P52630 851 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 RASA3Q14644 834 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 IQCB1Q15051 598 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 ASPRV1Q53RT3 343 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 NEK11Q8NG66 645 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 CCDC127Q96BQ5 260 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 HSP90B2PQ58FF3 399 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 GPATCH4Q5T3I0 446 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 DISC1Q9NRI5 854 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
ARHGEF40-206ENST00000555232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.59□□□□□ -0.232e-7■■□□□ 11.9
ARHGEF40-206ENST00000555232 ADAMTS3O15072 1205 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 CYTH3O43739 400 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 DGKZQ13574 1117 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 GRM4Q14833 912 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 GADL1Q6ZQY3 521 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 PANK4Q9NVE7 773 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 TFR2Q9UP52 801 aa13.58□□□□□ -0.23
ARHGEF40-206ENST00000555232 NDUFB10O96000 172 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 CAPN2P17655 700 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 TM4SF1P30408 202 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 CCDC17Q96LX7 622 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PYM1Q9BRP8 204 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 GOPCQ9HD26 462 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PAXBP1Q9Y5B6 917 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 ZHX2Q9Y6X8 837 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 USO1O60763 962 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PTPAQ15257 358 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 MRFAP1L1Q96HT8 127 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 AGXT2Q9BYV1 514 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PRPF6O94906 941 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 HMGB2P26583 209 aaKnown RBP13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 LRCH2Q5VUJ6 765 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PROM2Q8N271 834 aa13.58□□□□□ -0.24
ARHGEF40-206ENST00000555232 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
ARHGEF40-206ENST00000555232 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms