RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 CCDC96Q2M329 555 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 TTBK2Q6IQ55 1244 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 DEFB128Q7Z7B8 93 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 IL27Q8NEV9 243 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 NECAB3Q96P71 396 aaPredicted RBP15.53■□□□□ 0.08
XRCC3-212ENST00000555231 ALDH8A1Q9H2A2 487 aaPredicted RBP15.53■□□□□ 0.08
XRCC3-212ENST00000555231 VTA1Q9NP79 307 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 Q9Y3F1 56 aa15.53■□□□□ 0.08
XRCC3-212ENST00000555231 FOXP2O15409 715 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.08
XRCC3-212ENST00000555231 MYL3P08590 195 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 ALDH5A1P51649 535 aaPredicted RBP15.52■□□□□ 0.08
XRCC3-212ENST00000555231 DUSP28Q4G0W2 176 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 DIEXFQ68CQ4 756 aaKnown RBP15.52■□□□□ 0.08
XRCC3-212ENST00000555231 MORC4Q8TE76 937 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 SEZ6LQ9BYH1 1024 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 CERS4Q9HA82 394 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 PCDHA11Q9Y5I1 949 aa15.52■□□□□ 0.08
XRCC3-212ENST00000555231 TNKSO95271 1327 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 TTC41PQ6P2S7 1318 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 NFIBO00712 420 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 ERC2O15083 957 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 ICAM1P05362 532 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 ATP2A2P16615 1042 aaKnown RBP15.51■□□□□ 0.07
XRCC3-212ENST00000555231 TFF2Q03403 129 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 PPP4R3BQ5MIZ7 849 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 RANBP17Q9H2T7 1088 aaKnown RBP15.51■□□□□ 0.07
XRCC3-212ENST00000555231 POLR3EQ9NVU0 708 aa15.51■□□□□ 0.07
XRCC3-212ENST00000555231 FRMPD2Q68DX3 1309 aaPredicted RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 PRRC2BQ5JSZ5 2229 aaKnown RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 SCN10AQ9Y5Y9 1956 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 PTPDC1A2A3K4 754 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 PURAQ00577 322 aaKnown RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 SLC30A10Q6XR72 485 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 OR6J1Q8NGC5 347 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 TSPYL2Q9H2G4 693 aaPredicted RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 GPCPD1Q9NPB8 672 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 ADD3Q9UEY8 706 aaKnown RBP15.5■□□□□ 0.07
XRCC3-212ENST00000555231 NCOR1O75376 2440 aa15.5■□□□□ 0.07
XRCC3-212ENST00000555231 TRIP12Q14669 1992 aaPredicted RBP15.49■□□□□ 0.07
XRCC3-212ENST00000555231 CHD7Q9P2D1 2997 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 TET1Q8NFU7 2136 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 TANC1Q9C0D5 1861 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 CA3P07451 260 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 SUPT20HL2P0C7V6 817 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 CALML3P27482 149 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 TMEM67Q5HYA8 995 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 RRP12Q5JTH9 1297 aaKnown RBP15.49■□□□□ 0.07
XRCC3-212ENST00000555231 SYDE2Q5VT97 1194 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 COPS5Q92905 334 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 GPHNQ9NQX3 736 aaPredicted RBP15.49■□□□□ 0.07
XRCC3-212ENST00000555231 PTPRSQ13332 1948 aa15.49■□□□□ 0.07
XRCC3-212ENST00000555231 RBM47A0AV96 593 aaKnown RBP15.48■□□□□ 0.07
XRCC3-212ENST00000555231 PFKMP08237 780 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 BMP1P13497 986 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 CPT1AP50416 773 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 KCNQ1P51787 676 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 NBPF20Q3BBV1 942 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 KRT40Q6A162 431 aa15.48■□□□□ 0.07
XRCC3-212ENST00000555231 MTG1Q9BT17 334 aaPredicted RBP15.48■□□□□ 0.07
XRCC3-212ENST00000555231 EPOPA6NHQ4 379 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 ARHGEF15O94989 841 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 NOVP48745 357 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 BTNL9Q6UXG8 535 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 RNF207Q6ZRF8 634 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 CLEC4DQ8WXI8 215 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 MTCH2Q9Y6C9 303 aa15.47■□□□□ 0.07
XRCC3-212ENST00000555231 GTPBP6O43824 516 aaPredicted RBP15.46■□□□□ 0.07
XRCC3-212ENST00000555231 ORC4O43929 436 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 TOP1P11387 765 aaKnown RBP15.46■□□□□ 0.07
XRCC3-212ENST00000555231 ACTN1P12814 892 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 MX1P20591 662 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 PDE4DQ08499 809 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 PPP2R5BQ15173 497 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
XRCC3-212ENST00000555231 REV3LO60673 3130 aa15.46■□□□□ 0.07
XRCC3-212ENST00000555231 IQCF3P0C7M6 154 aa15.45■□□□□ 0.06
XRCC3-212ENST00000555231 RPS6P62753 249 aaKnown RBP15.45■□□□□ 0.06
XRCC3-212ENST00000555231 SPRED2Q7Z698 418 aa15.45■□□□□ 0.06
XRCC3-212ENST00000555231 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
XRCC3-212ENST00000555231 SLC9A7Q96T83 725 aa15.45■□□□□ 0.06
XRCC3-212ENST00000555231 COL4A4P53420 1690 aaPredicted RBP15.44■□□□□ 0.06
XRCC3-212ENST00000555231 LOC102724159A0A0B4J2E5 919 aa15.44■□□□□ 0.06
XRCC3-212ENST00000555231 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
XRCC3-212ENST00000555231 ARIH2O95376 493 aa15.44■□□□□ 0.06
XRCC3-212ENST00000555231 FGRP09769 529 aa15.44■□□□□ 0.06
XRCC3-212ENST00000555231 TXNP10599 105 aaKnown RBP15.44■□□□□ 0.06
XRCC3-212ENST00000555231 PDHBP11177 359 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms