RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-211ENST00000555055 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
XRCC3-211ENST00000555055 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-211ENST00000555055 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
XRCC3-211ENST00000555055 FANCGO15287 622 aa16.66■□□□□ 0.26
XRCC3-211ENST00000555055 RAD17O75943 681 aa16.66■□□□□ 0.26
XRCC3-211ENST00000555055 ADCY7P51828 1080 aa16.66■□□□□ 0.26
XRCC3-211ENST00000555055 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-211ENST00000555055 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
XRCC3-211ENST00000555055 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 FCER1AP12319 257 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 RBL2Q08999 1139 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 CERKLQ49MI3 558 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 CCDC12Q8WUD4 166 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 ZDHHC15Q96MV8 337 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 A0A1B0GTH6 734 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 RNF225M0QZC1 329 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 PAK1Q13153 545 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-211ENST00000555055 KRT31Q15323 416 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
XRCC3-211ENST00000555055 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 KLRC4O43908 158 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 BAG1Q99933 345 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-211ENST00000555055 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
XRCC3-211ENST00000555055 SUGT1Q9Y2Z0 365 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 SLC1A4P43007 532 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 USH1GQ495M9 461 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-211ENST00000555055 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
XRCC3-211ENST00000555055 PCNTO95613 3336 aa16.64■□□□□ 0.25
XRCC3-211ENST00000555055 HNRNPH2P55795 449 aaKnown RBP16.63■□□□□ 0.25
XRCC3-211ENST00000555055 GPS2Q13227 327 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 CALCRLQ16602 461 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
XRCC3-211ENST00000555055 TRIM34Q9BYJ4 488 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 MYH4Q9Y623 1939 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 CASP14P31944 242 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 STK4Q13043 487 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 IKQ13123 557 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-211ENST00000555055 POTEAQ6S8J7 498 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 GPIHBP1Q8IV16 184 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 FLAD1Q8NFF5 587 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 IRX2Q9BZI1 471 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-211ENST00000555055 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 PLIN4Q96Q06 1357 aa16.63■□□□□ 0.25
XRCC3-211ENST00000555055 N4BP3O15049 544 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 ARHGAP6O43182 974 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
XRCC3-211ENST00000555055 ASIC1P78348 528 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 MCM6Q14566 821 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 KCNK18Q7Z418 384 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-211ENST00000555055 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 ECM1Q16610 540 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 KBTBD4Q9NVX7 518 aa16.62■□□□□ 0.25
XRCC3-211ENST00000555055 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
XRCC3-211ENST00000555055 SMCHD1A6NHR9 2005 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 GH2P01242 217 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 CAPN2P17655 700 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 ICA1Q05084 483 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
XRCC3-211ENST00000555055 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 LRWD1Q9UFC0 647 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 ZBTB5O15062 677 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 ECE1P42892 770 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 PDE4DQ08499 809 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
XRCC3-211ENST00000555055 MSL3Q8N5Y2 521 aaKnown RBP16.61■□□□□ 0.25
XRCC3-211ENST00000555055 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
XRCC3-211ENST00000555055 TRIM9Q9C026 710 aa16.61■□□□□ 0.25
XRCC3-211ENST00000555055 PSTPIP2Q9H939 334 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms