RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	TMEM40	Q8WWA1	233 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	DIO2	Q92813	273 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TRIM52	Q96A61	297 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	WDR89	Q96FK6	387 aa	Predicted RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	WNK4	Q96J92	1243 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	INSM2	Q96T92	566 aa	Predicted RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	KLF16	Q9BXK1	252 aa	Predicted RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	WDR12	Q9GZL7	423 aa	Known RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SH3GLB2	Q9NR46	395 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PPM1H	Q9ULR3	514 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ANKRD6	Q9Y2G4	727 aa		4.09	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	DLX3	O60479	287 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	WDR4	P57081	412 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	APBA1	Q02410	837 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	DSG1	Q02413	1049 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SEPT2	Q15019	361 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PDCD1	Q15116	288 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PRICKLE2	Q7Z3G6	844 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PTRH1	Q86Y79	214 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TRIM22	Q8IYM9	498 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SH3KBP1	Q96B97	665 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PLPPR2	Q96GM1	343 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TEKT5	Q96M29	485 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	RIPOR3	Q96MK2	946 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PPP1R16B	Q96T49	567 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SORBS1	Q9BX66	1292 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	AP1M1	Q9BXS5	423 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SEZ6L	Q9BYH1	1024 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	KRTAP17-1	Q9BYP8	105 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	VPS11	Q9H270	941 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ZCCHC17	Q9NP64	241 aa	Known RBP	4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	FBXO2	Q9UK22	296 aa	Predicted RBP	4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	RCAN3	Q9UKA8	241 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	MINPP1	Q9UNW1	487 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PTPN22	Q9Y2R2	807 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SNCAIP	Q9Y6H5	919 aa		4.08	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TRAV20	A0A0B4J274	112 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TRAF5	O00463	557 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TOR1B	O14657	336 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ALDH2	P05091	517 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	MTHFD1	P11586	935 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	VEGFA	P15692	232 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	CYP4F3	Q08477	520 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	KLHDC7A	Q5VTJ3	777 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TXNDC11	Q6PKC3	985 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	NLRC3	Q7RTR2	1065 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	KRTAP19-1	Q8IUB9	90 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	IGSF22	Q8N9C0	903 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	IL17RE	Q8NFR9	667 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SCARF2	Q96GP6	870 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	AARSD1	Q9BTE6	412 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	KRTAP4-9	Q9BYQ8	210 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	MKS1	Q9NXB0	559 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SAMD15	Q9P1V8	674 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	FBXO10	Q9UK96	956 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	E2F8	A0AVK6	867 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	EIF3F	O00303	357 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ELL2	O00472	640 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	NCAM2	O15394	837 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ORC4	O43929	436 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	BRINP1	O60477	761 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	EOMES	O95936	686 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SRGAP2C	P0DJJ0	459 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	NME1	P15531	152 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	RHOQ	P17081	205 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TM4SF4	P48230	202 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	CTCF	P49711	727 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	CACNB2	Q08289	660 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	POU4F2	Q12837	409 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SFSWAP	Q12872	951 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	LRRC32	Q14392	662 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SURF1	Q15526	300 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	CCDC92	Q53HC0	331 aa	Predicted RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SLC27A3	Q5K4L6	730 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	BROX	Q5VW32	411 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	NLRP13	Q86W25	1043 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SULF2	Q8IWU5	870 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	GSTCD	Q8NEC7	633 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	UBXN10	Q96LJ8	280 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	SLC6A18	Q96N87	628 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	PNMA5	Q96PV4	448 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	HAUS7	Q99871	368 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	CHCHD6	Q9BRQ6	235 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	LRFN3	Q9BTN0	628 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ADAM19	Q9H013	955 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	RASSF4	Q9H2L5	321 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	BRD7	Q9NPI1	651 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	STRN4	Q9NRL3	753 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ANKEF1	Q9NU02	776 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	INTS7	Q9NVH2	962 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TRAK1	Q9UPV9	953 aa		4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.07	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	TBX18	O95935	607 aa		4.06	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	ADH1A	P07327	375 aa		4.06	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	HSP90AA1	P07900	732 aa	Known RBP	4.06	□□□□□ -1.76
RALGAPA1-208	ENST00000554573	EDN3	P14138	238 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms