RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 BCL9LQ86UU0 1499 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 EPHB4P54760 987 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 NAP1L1P55209 391 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 NNTQ13423 1086 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 ENOX2Q16206 610 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 TACO1Q9BSH4 297 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 KLC4Q9NSK0 619 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 STX8Q9UNK0 236 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 KRT14P02533 472 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 LSP1P33241 339 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 ITPK1Q13572 414 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 MICALCLQ6ZW33 695 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 RNPC3Q96LT9 517 aaKnown RBP18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 ZIM3Q96PE6 472 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 KANSL2Q9H9L4 492 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 MLXIPQ9HAP2 919 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 MCM8Q9UJA3 840 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 CAPN11Q9UMQ6 739 aa18.8■□□□□ 0.6
PPP4R3A-202ENST00000554390 ELF1P32519 619 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 GUCY1A3Q02108 690 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 PTPROQ16827 1216 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 SLC35G1Q2M3R5 365 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 FAM207AQ9NSI2 230 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 EPHB6O15197 1021 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 CYLC1P35663 651 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 IL6STP40189 918 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 STK4Q13043 487 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 SPATA4Q8NEY3 305 aa18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-202ENST00000554390 RASSF10A6NK89 507 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 NCK2O43639 380 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 IBSPP21815 317 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 TFAP4Q01664 338 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 SF3B2Q13435 895 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 PREPLQ4J6C6 727 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 YTHDF3Q7Z739 585 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 GJA10Q969M2 543 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 EPN3Q9H201 632 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 CENPHQ9H3R5 247 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 SNX12Q9UMY4 172 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 NUP98P52948 1817 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 UBA7P41226 1012 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 RNASE9P60153 205 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 TBC1D8BQ0IIM8 1120 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 CCDC40Q4G0X9 1142 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 EMBQ6PCB8 327 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 TMC4Q7Z404 712 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 VCPKMTQ9H867 229 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 DISC1Q9NRI5 854 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 LETM2Q2VYF4 491 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 BLIDQ8IZY5 108 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 N4BP2L2Q92802 583 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 TUBGCP2Q9BSJ2 902 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 NHEJ1Q9H9Q4 299 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 SLC39A2Q9NP94 309 aa18.78■□□□□ 0.6
PPP4R3A-202ENST00000554390 MYH10P35580 1976 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 CCDC194A0A1B0GVG4 234 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 NTSR2O95665 410 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 SMTNP53814 917 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 ACTN3Q08043 901 aaPredicted RBP18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 ADSSL1Q8N142 457 aa18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 PURBQ96QR8 312 aaKnown RBP18.77■□□□□ 0.6
PPP4R3A-202ENST00000554390 ZNF263O14978 683 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 KCNQ2O43526 872 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 NF2P35240 595 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 MTIF2P46199 727 aaKnown RBP18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 SEC24CP53992 1094 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 APBA1Q02410 837 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 DIXDC1Q155Q3 683 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 MEA1Q16626 185 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 ANKRD40Q6AI12 368 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 CCDC13Q8IYE1 715 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 NID2Q14112 1375 aa18.77■□□□□ 0.59
PPP4R3A-202ENST00000554390 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 LGALS16A8MUM7 142 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 CAMTA2O94983 1202 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 KIF5AQ12840 1032 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 IFT88Q13099 833 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 KDM7AQ6ZMT4 941 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 DTHD1Q6ZMT9 781 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 DYMQ7RTS9 669 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 C4orf32Q8N8J7 132 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 MIEF2Q96C03 454 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 STIM2Q9P246 746 aa18.76■□□□□ 0.59
PPP4R3A-202ENST00000554390 ODF2LQ9ULJ1 636 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms