RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
TMEM253-203ENST00000554329 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
TMEM253-203ENST00000554329 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
TMEM253-203ENST00000554329 RBM27Q9P2N5 1060 aaKnown RBP13.5□□□□□ -0.25
TMEM253-203ENST00000554329 FAM184BQ9ULE4 1060 aa13.5□□□□□ -0.25
TMEM253-203ENST00000554329 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 OPLAHO14841 1288 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 MSCO60682 206 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 CFBP00751 764 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
TMEM253-203ENST00000554329 SMPD1P17405 629 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
TMEM253-203ENST00000554329 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
TMEM253-203ENST00000554329 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
TMEM253-203ENST00000554329 COPS5Q92905 334 aa13.49□□□□□ -0.25
TMEM253-203ENST00000554329 PRDM5Q9NQX1 630 aaPredicted RBP13.49□□□□□ -0.25
TMEM253-203ENST00000554329 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
TMEM253-203ENST00000554329 MCM5P33992 734 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
TMEM253-203ENST00000554329 KCNA10Q16322 511 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 TAPT1Q6NXT6 567 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 SLC39A5Q6ZMH5 540 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 SH3RF1Q7Z6J0 888 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 MICU3Q86XE3 530 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 ARRDC4Q8NCT1 418 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
TMEM253-203ENST00000554329 LAMA3Q16787 3333 aa13.48□□□□□ -0.25
TMEM253-203ENST00000554329 A0A1W2PQ45 241 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-203ENST00000554329 A0A1W2PQY0 241 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 ASB14A6NK59 587 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 CTAGE5O15320 804 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 DYNC1LI2O43237 492 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-203ENST00000554329 DTNBO60941 627 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
TMEM253-203ENST00000554329 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
TMEM253-203ENST00000554329 SYTL5Q8TDW5 730 aaPredicted RBP13.47□□□□□ -0.25
TMEM253-203ENST00000554329 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
TMEM253-203ENST00000554329 ABCB11O95342 1321 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 ZBTB5O15062 677 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
TMEM253-203ENST00000554329 ARIH2O95376 493 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 MAGEA10P43363 369 aaPredicted RBP13.46□□□□□ -0.25
TMEM253-203ENST00000554329 ACLYP53396 1101 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 PDE4DQ08499 809 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 RNF180Q86T96 592 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 TLK2Q86UE8 772 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
TMEM253-203ENST00000554329 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 IL31RAQ8NI17 732 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
TMEM253-203ENST00000554329 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
TMEM253-203ENST00000554329 AMNQ9BXJ7 453 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 SNX14Q9Y5W7 946 aa13.46□□□□□ -0.25
TMEM253-203ENST00000554329 LTBP2Q14767 1821 aa13.46□□□□□ -0.26
TMEM253-203ENST00000554329 DUSP11O75319 330 aaKnown RBP13.45□□□□□ -0.26
TMEM253-203ENST00000554329 ASGR1P07306 291 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 MYCLP12524 364 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-203ENST00000554329 PSMC6P62333 389 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-203ENST00000554329 CXCL17Q6UXB2 119 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 SEPT14Q6ZU15 432 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 CTCFLQ8NI51 663 aaPredicted RBP13.45□□□□□ -0.26
TMEM253-203ENST00000554329 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 RIOX1Q9H6W3 641 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
TMEM253-203ENST00000554329 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
TMEM253-203ENST00000554329 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 NT5C2P49902 561 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 GJA9P57773 515 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 CHMP4BP1P59074 171 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 EXOSC10Q01780 885 aaKnown RBP13.44□□□□□ -0.26
TMEM253-203ENST00000554329 TLE2Q04725 743 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
TMEM253-203ENST00000554329 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 RMDN3Q96TC7 470 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 WDR11Q9BZH6 1224 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 ADD3Q9UEY8 706 aaKnown RBP13.44□□□□□ -0.26
TMEM253-203ENST00000554329 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
TMEM253-203ENST00000554329 SLC12A7Q9Y666 1083 aa13.44□□□□□ -0.26
TMEM253-203ENST00000554329 LAMA2P24043 3122 aaKnown RBP13.44□□□□□ -0.26
TMEM253-203ENST00000554329 TRIOBPQ9H2D6 2365 aa13.43□□□□□ -0.26
TMEM253-203ENST00000554329 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
TMEM253-203ENST00000554329 DDAH1O94760 285 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms