RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 PURBQ96QR8 312 aaKnown RBP15.17■□□□□ 0.02
SHMT2-211ENST00000554310 TSEN34Q9BSV6 310 aaKnown RBP15.17■□□□□ 0.02
SHMT2-211ENST00000554310 UPF3AQ9H1J1 476 aaKnown RBP15.17■□□□□ 0.02
SHMT2-211ENST00000554310 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
SHMT2-211ENST00000554310 MOXD2PA6NHM9 499 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 CALM1P0DP23 149 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 CALM2P0DP24 149 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 CALM3P0DP25 149 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 EDNRBP24530 442 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 ADCYAP1R1P41586 468 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 GJA9P57773 515 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 GHRHRQ02643 423 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 SNX17Q15036 470 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 SLC35G1Q2M3R5 365 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 SGMS1Q86VZ5 419 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 HOMER1Q86YM7 354 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 KLHDC9Q8NEP7 349 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 NEK1Q96PY6 1258 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 LZTS2Q9BRK4 669 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
SHMT2-211ENST00000554310 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-211ENST00000554310 CYTH3O43739 400 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 C6orf222P0C671 652 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 SMARCA1P28370 1054 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 GNAQP50148 359 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 ATN1P54259 1190 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 NKX3-2P78367 333 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PDE4DQ08499 809 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 COL9A3Q14050 684 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 C1orf53Q5VUE5 145 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PCSK9Q8NBP7 692 aaKnown RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 SYTL5Q8TDW5 730 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PIGSQ96S52 555 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 MAP3K20Q9NYL2 800 aaKnown RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PCDHA1Q9Y5I3 950 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
SHMT2-211ENST00000554310 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 RANBP2P49792 3224 aaKnown RBP15.15■□□□□ 0.02
SHMT2-211ENST00000554310 PNMA6FA0A0J9YX94 578 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 A0A1W2PQ45 241 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 A0A1W2PQY0 241 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 HSPA4P34932 840 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 ACLYP53396 1101 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 RTP1P59025 263 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 IQSEC1Q6DN90 963 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 CCSAPQ6IQ19 270 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 TAPT1Q6NXT6 567 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 SLC39A5Q6ZMH5 540 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 NOL8Q76FK4 1167 aaKnown RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 TLK2Q86UE8 772 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 SAMD3Q8N6K7 520 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 KCNB2Q92953 911 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 FERMT2Q96AC1 680 aa15.14■□□□□ 0.01
SHMT2-211ENST00000554310 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 GNEQ9Y223 722 aaKnown RBP15.14■□□□□ 0.01
SHMT2-211ENST00000554310 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 MYADML2A6NDP7 307 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 OPLAHO14841 1288 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 SMPD1P17405 629 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 HSD17B4P51659 736 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
SHMT2-211ENST00000554310 NSUN6Q8TEA1 469 aaKnown RBP15.13■□□□□ 0.01
SHMT2-211ENST00000554310 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 PRO3102Q9H379 93 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 PDGFCQ9NRA1 345 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 ATP11BQ9Y2G3 1177 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 Q9Y3F1 56 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
SHMT2-211ENST00000554310 A0A1W2PPC1 479 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 RBM47A0AV96 593 aaKnown RBP15.12■□□□□ 0.01
SHMT2-211ENST00000554310 CTAGE5O15320 804 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 CFBP00751 764 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
SHMT2-211ENST00000554310 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
SHMT2-211ENST00000554310 KCNA10Q16322 511 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 TRIM60Q495X7 471 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 DUSP28Q4G0W2 176 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 GNASQ5JWF2 1037 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 SCFD2Q8WU76 684 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 TBC1D5Q92609 795 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
SHMT2-211ENST00000554310 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
SHMT2-211ENST00000554310 AP5M1Q9H0R1 490 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms